Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 CU639417.3-201ENST00000624240 1404 ntBASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 AL138831.2-201ENST00000606564 490 ntBASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 FEM1AP1-201ENST00000431297 1995 ntBASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
COL13A1Q5TAT6 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 AC092506.1-202ENST00000401022 528 ntBASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 MIR3180-4-201ENST00000582223 153 ntBASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
COL13A1Q5TAT6 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AP001271.2-201ENST00000624018 1556 ntBASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 CNN2P2-201ENST00000443536 909 ntBASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 CNN2P3-201ENST00000450201 906 ntBASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 SPTSSB-204ENST00000617024 1292 ntBASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AL136317.3-201ENST00000618497 906 ntBASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
COL13A1Q5TAT6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.68■□□□□ 0.9
COL13A1Q5TAT6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 PIN1P1-201ENST00000412108 996 ntBASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 AC108073.2-201ENST00000464002 357 ntBASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 KRT19P2-202ENST00000557173 1012 ntBASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 AL353135.1-201ENST00000606729 504 ntBASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
COL13A1Q5TAT6 BCAR1-209ENST00000546196 1340 ntBASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms