Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 UROS-202ENST00000368778 1556 ntTSL 2 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
HMGXB3Q12766 FUOM-202ENST00000368551 628 ntTSL 3 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AC254562.1-201ENST00000417586 456 ntBASIC32.47■■■□□ 2.79
HMGXB3Q12766 AC023274.1-201ENST00000418278 595 ntBASIC32.47■■■□□ 2.79
HMGXB3Q12766 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
HMGXB3Q12766 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 AC002310.6-201ENST00000624451 1377 ntBASIC32.47■■■□□ 2.79
HMGXB3Q12766 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC32.47■■■□□ 2.79
HMGXB3Q12766 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
HMGXB3Q12766 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 AL024508.2-201ENST00000607749 1894 ntBASIC32.46■■■□□ 2.79
HMGXB3Q12766 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
HMGXB3Q12766 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
HMGXB3Q12766 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC32.46■■■□□ 2.79
HMGXB3Q12766 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
HMGXB3Q12766 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC32.45■■■□□ 2.79
HMGXB3Q12766 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC32.45■■■□□ 2.79
HMGXB3Q12766 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
HMGXB3Q12766 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC32.45■■■□□ 2.78
HMGXB3Q12766 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC32.45■■■□□ 2.78
HMGXB3Q12766 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC32.45■■■□□ 2.78
HMGXB3Q12766 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC32.45■■■□□ 2.78
HMGXB3Q12766 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC32.45■■■□□ 2.78
HMGXB3Q12766 LINC00565-201ENST00000562710 2331 ntBASIC32.45■■■□□ 2.78
HMGXB3Q12766 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC32.45■■■□□ 2.78
HMGXB3Q12766 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 FP475955.4-201ENST00000623131 1990 ntBASIC32.44■■■□□ 2.78
HMGXB3Q12766 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
HMGXB3Q12766 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 CALY-203ENST00000368558 825 ntTSL 5 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 AC073621.1-201ENST00000392730 636 ntBASIC32.44■■■□□ 2.78
HMGXB3Q12766 AL035633.1-201ENST00000406139 838 ntBASIC32.44■■■□□ 2.78
HMGXB3Q12766 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC32.44■■■□□ 2.78
HMGXB3Q12766 COX5A-206ENST00000568783 571 ntTSL 3 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 ORC5-208ENST00000626700 344 ntTSL 3 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
HMGXB3Q12766 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
HMGXB3Q12766 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC32.44■■■□□ 2.78
HMGXB3Q12766 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC32.44■■■□□ 2.78
HMGXB3Q12766 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC32.43■■■□□ 2.78
HMGXB3Q12766 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
HMGXB3Q12766 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC32.43■■■□□ 2.78
HMGXB3Q12766 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC32.43■■■□□ 2.78
HMGXB3Q12766 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC32.43■■■□□ 2.78
HMGXB3Q12766 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC32.43■■■□□ 2.78
HMGXB3Q12766 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
HMGXB3Q12766 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
HMGXB3Q12766 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC32.42■■■□□ 2.78
HMGXB3Q12766 MTCL1P1-201ENST00000446207 792 ntBASIC32.42■■■□□ 2.78
HMGXB3Q12766 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC32.42■■■□□ 2.78
HMGXB3Q12766 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 NKAPP1-205ENST00000585790 367 ntBASIC32.42■■■□□ 2.78
HMGXB3Q12766 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC32.42■■■□□ 2.78
HMGXB3Q12766 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC32.42■■■□□ 2.78
HMGXB3Q12766 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 PNMT-202ENST00000394246 821 ntTSL 2 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 ASL-204ENST00000395331 1538 ntTSL 5 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 PON3-203ENST00000427422 894 ntTSL 3 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC32.41■■■□□ 2.78
HMGXB3Q12766 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC32.41■■■□□ 2.78
HMGXB3Q12766 AC073592.4-201ENST00000623827 446 ntBASIC32.41■■■□□ 2.78
HMGXB3Q12766 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC32.4■■■□□ 2.78
HMGXB3Q12766 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms