Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ACIN1-210ENST00000554680 888 ntTSL 211.72□□□□□ -0.533e-19■□□□□ 8.9
LSM11P83369 WSB1-212ENST00000583096 834 ntTSL 39.37□□□□□ -0.913e-11■□□□□ 8.8
LSM11P83369 AAMP-210ENST00000494720 1134 ntTSL 219.27■□□□□ 0.683e-12■□□□□ 8.8
LSM11P83369 AAMP-208ENST00000475678 2270 ntTSL 215.65■□□□□ 0.13e-12■□□□□ 8.8
LSM11P83369 AAMP-209ENST00000489767 1833 ntTSL 515.21■□□□□ 0.033e-12■□□□□ 8.8
LSM11P83369 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.093e-12■□□□□ 8.8
LSM11P83369 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.72□□□□□ -0.213e-12■□□□□ 8.8
LSM11P83369 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.343e-12■□□□□ 8.8
LSM11P83369 VMP1-216ENST00000592790 4325 nt3.17□□□□□ -1.91e-6■□□□□ 8.8
LSM11P83369 NONO-203ENST00000373856 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.547e-15■□□□□ 8.8
LSM11P83369 NONO-211ENST00000473525 1430 ntTSL 59.71□□□□□ -0.867e-15■□□□□ 8.8
LSM11P83369 NONO-212ENST00000474431 644 ntTSL 57.11□□□□□ -1.277e-15■□□□□ 8.8
LSM11P83369 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -09e-10■□□□□ 8.8
LSM11P83369 MINK1-209ENST00000574453 4941 ntTSL 1 (best)14.58□□□□□ -0.089e-10■□□□□ 8.8
LSM11P83369 MINK1-207ENST00000572330 5299 ntTSL 514.08□□□□□ -0.169e-10■□□□□ 8.8
LSM11P83369 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.29e-10■□□□□ 8.8
LSM11P83369 MINK1-204ENST00000571207 4569 ntTSL 513.4□□□□□ -0.269e-10■□□□□ 8.8
LSM11P83369 MINK1-210ENST00000574871 3150 ntTSL 210.91□□□□□ -0.669e-10■□□□□ 8.8
LSM11P83369 TMEM94-219ENST00000581453 807 ntTSL 316.94■□□□□ 0.37e-11■□□□□ 8.8
LSM11P83369 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.09□□□□□ -0.159e-10■□□□□ 8.8
LSM11P83369 TMEM94-231ENST00000584694 528 ntTSL 512.8□□□□□ -0.367e-11■□□□□ 8.8
LSM11P83369 KLC4-211ENST00000469987 765 ntTSL 512.44□□□□□ -0.422e-8■□□□□ 8.8
LSM11P83369 FAM118A-212ENST00000479180 649 ntTSL 512.35□□□□□ -0.439e-10■□□□□ 8.8
LSM11P83369 MFSD8-241ENST00000641686 4991 ntAPPRIS P1 BASIC12.12□□□□□ -0.472e-8■□□□□ 8.8
LSM11P83369 NASP-209ENST00000472408 541 ntTSL 212.1□□□□□ -0.472e-8■□□□□ 8.8
LSM11P83369 KLC4-207ENST00000463063 841 ntTSL 311.94□□□□□ -0.52e-8■□□□□ 8.8
LSM11P83369 MFSD8-208ENST00000515130 3314 ntTSL 511.04□□□□□ -0.642e-8■□□□□ 8.8
LSM11P83369 MFSD8-256ENST00000641949 1640 ntBASIC10.71□□□□□ -0.692e-8■□□□□ 8.8
LSM11P83369 FAM118A-208ENST00000462361 712 ntTSL 210.39□□□□□ -0.759e-10■□□□□ 8.8
LSM11P83369 MFSD8-254ENST00000641882 1792 nt10.34□□□□□ -0.752e-8■□□□□ 8.8
LSM11P83369 MFSD8-257ENST00000642012 1711 nt10.3□□□□□ -0.762e-8■□□□□ 8.8
LSM11P83369 MFSD8-206ENST00000509826 1720 ntTSL 29.99□□□□□ -0.812e-8■□□□□ 8.8
LSM11P83369 MFSD8-226ENST00000641388 778 nt9.26□□□□□ -0.932e-8■□□□□ 8.8
LSM11P83369 MFSD8-251ENST00000641843 1596 nt9.25□□□□□ -0.932e-8■□□□□ 8.8
LSM11P83369 MFSD8-223ENST00000641340 2098 nt9□□□□□ -0.972e-8■□□□□ 8.8
LSM11P83369 MFSD8-259ENST00000642042 2303 ntBASIC9□□□□□ -0.972e-8■□□□□ 8.8
LSM11P83369 MFSD8-229ENST00000641413 854 nt8.97□□□□□ -0.972e-8■□□□□ 8.8
LSM11P83369 MFSD8-240ENST00000641658 1731 nt8.74□□□□□ -1.012e-8■□□□□ 8.8
LSM11P83369 MFSD8-260ENST00000642078 1747 nt8.48□□□□□ -1.052e-8■□□□□ 8.8
LSM11P83369 MFSD8-252ENST00000641869 1076 nt7.69□□□□□ -1.182e-8■□□□□ 8.8
LSM11P83369 MFSD8-207ENST00000513559 1813 ntTSL 2 BASIC7.52□□□□□ -1.212e-8■□□□□ 8.8
LSM11P83369 MFSD8-253ENST00000641870 2109 nt7.31□□□□□ -1.242e-8■□□□□ 8.8
LSM11P83369 MFSD8-227ENST00000641393 4069 ntBASIC7.24□□□□□ -1.252e-8■□□□□ 8.8
LSM11P83369 MFSD8-215ENST00000641146 4780 nt7.23□□□□□ -1.252e-8■□□□□ 8.8
LSM11P83369 MFSD8-222ENST00000641332 2759 nt7.18□□□□□ -1.262e-8■□□□□ 8.8
LSM11P83369 MFSD8-218ENST00000641186 4448 ntBASIC7.18□□□□□ -1.262e-8■□□□□ 8.8
LSM11P83369 MFSD8-244ENST00000641742 1823 nt7.15□□□□□ -1.262e-8■□□□□ 8.8
LSM11P83369 MFSD8-217ENST00000641178 4374 ntBASIC7.08□□□□□ -1.282e-8■□□□□ 8.8
LSM11P83369 MFSD8-246ENST00000641748 3201 nt6.79□□□□□ -1.322e-8■□□□□ 8.8
LSM11P83369 MFSD8-230ENST00000641434 3209 nt6.58□□□□□ -1.362e-8■□□□□ 8.8
LSM11P83369 MFSD8-247ENST00000641753 3007 nt6.19□□□□□ -1.422e-8■□□□□ 8.8
LSM11P83369 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.492e-8■□□□□ 8.8
LSM11P83369 MFSD8-219ENST00000641228 2559 ntBASIC5.65□□□□□ -1.512e-8■□□□□ 8.8
LSM11P83369 MFSD8-239ENST00000641590 2479 ntBASIC5.39□□□□□ -1.552e-8■□□□□ 8.8
LSM11P83369 MFSD8-228ENST00000641397 3925 nt5.06□□□□□ -1.62e-8■□□□□ 8.8
LSM11P83369 MFSD8-232ENST00000641464 4197 nt4.68□□□□□ -1.662e-8■□□□□ 8.8
LSM11P83369 MFSD8-255ENST00000641928 4083 nt4.4□□□□□ -1.72e-8■□□□□ 8.8
LSM11P83369 MFSD8-248ENST00000641774 4247 nt4.34□□□□□ -1.722e-8■□□□□ 8.8
LSM11P83369 MFSD8-236ENST00000641509 4050 ntBASIC4.33□□□□□ -1.722e-8■□□□□ 8.8
LSM11P83369 MFSD8-235ENST00000641508 4321 nt4.21□□□□□ -1.742e-8■□□□□ 8.8
LSM11P83369 MFSD8-216ENST00000641147 4009 ntBASIC4.12□□□□□ -1.752e-8■□□□□ 8.8
LSM11P83369 MFSD8-242ENST00000641690 4199 ntBASIC3.92□□□□□ -1.782e-8■□□□□ 8.8
LSM11P83369 MFSD8-233ENST00000641482 4860 ntBASIC3.88□□□□□ -1.792e-8■□□□□ 8.8
LSM11P83369 MFSD8-211ENST00000641092 4054 nt3.8□□□□□ -1.82e-8■□□□□ 8.8
LSM11P83369 MFSD8-258ENST00000642034 4132 nt3.72□□□□□ -1.812e-8■□□□□ 8.8
LSM11P83369 MFSD8-210ENST00000641025 4261 nt3.61□□□□□ -1.832e-8■□□□□ 8.8
LSM11P83369 MFSD8-212ENST00000641133 5109 nt3.54□□□□□ -1.842e-8■□□□□ 8.8
LSM11P83369 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.457e-9■□□□□ 8.8
LSM11P83369 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.5■□□□□ 0.237e-9■□□□□ 8.8
LSM11P83369 SEMA3B-201ENST00000416295 1088 ntTSL 515.79■□□□□ 0.127e-9■□□□□ 8.8
LSM11P83369 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.07■□□□□ 0.483e-7■□□□□ 8.8
LSM11P83369 INTS11-233ENST00000527098 2004 ntTSL 214.39□□□□□ -0.113e-7■□□□□ 8.8
LSM11P83369 FTCD-211ENST00000494498 840 ntTSL 317■□□□□ 0.313e-11■□□□□ 8.7
LSM11P83369 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.081e-10■□□□□ 8.7
LSM11P83369 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.11□□□□□ -0.151e-10■□□□□ 8.7
LSM11P83369 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.75□□□□□ -0.211e-10■□□□□ 8.7
LSM11P83369 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.987e-14■□□□□ 8.7
LSM11P83369 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.219e-6■□□□□ 8.7
LSM11P83369 TSTA3-203ENST00000525274 671 ntTSL 322.24■■□□□ 1.159e-6■□□□□ 8.7
LSM11P83369 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.75■■□□□ 1.079e-6■□□□□ 8.7
LSM11P83369 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.58■■□□□ 1.053e-9■□□□□ 8.7
LSM11P83369 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.039e-6■□□□□ 8.7
LSM11P83369 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.843e-9■□□□□ 8.7
LSM11P83369 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.719e-6■□□□□ 8.7
LSM11P83369 ARL6IP4-209ENST00000442210 716 ntTSL 319.3■□□□□ 0.683e-9■□□□□ 8.7
LSM11P83369 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.28■□□□□ 0.689e-6■□□□□ 8.7
LSM11P83369 R3HDM4-204ENST00000589428 1704 ntTSL 319.19■□□□□ 0.669e-6■□□□□ 8.7
LSM11P83369 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.669e-6■□□□□ 8.7
LSM11P83369 ARHGAP27P1-BPTFP1-KPNA2P3-202ENST00000579125 1318 ntTSL 1 (best)18.63■□□□□ 0.579e-6■□□□□ 8.7
LSM11P83369 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.573e-9■□□□□ 8.7
LSM11P83369 SEPT9-245ENST00000592481 1291 ntTSL 518.57■□□□□ 0.569e-6■□□□□ 8.7
LSM11P83369 TSTA3-214ENST00000531473 2220 ntTSL 1 (best)18.57■□□□□ 0.569e-6■□□□□ 8.7
LSM11P83369 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.41■□□□□ 0.542e-7■□□□□ 8.7
LSM11P83369 TSTA3-215ENST00000532308 951 ntTSL 518.38■□□□□ 0.539e-6■□□□□ 8.7
LSM11P83369 MAP3K11-202ENST00000524848 2139 ntTSL 218.37■□□□□ 0.539e-6■□□□□ 8.7
LSM11P83369 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.519e-6■□□□□ 8.7
LSM11P83369 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.03■□□□□ 0.482e-7■□□□□ 8.7
LSM11P83369 MFSD10-210ENST00000514031 950 ntTSL 217.94■□□□□ 0.462e-7■□□□□ 8.7
LSM11P83369 MFSD10-203ENST00000503596 1589 ntTSL 517.87■□□□□ 0.452e-7■□□□□ 8.7
LSM11P83369 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.439e-6■□□□□ 8.7
Retrieved 100 of 11,495 protein–RNA pairs in 48 ms