Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABREP78334 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GABREP78334 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.59■□□□□ 0.41
GABREP78334 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GABREP78334 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
GABREP78334 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GABREP78334 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.59■□□□□ 0.41
GABREP78334 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 AC034236.2-201ENST00000606662 1610 ntBASIC17.58■□□□□ 0.41
GABREP78334 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GABREP78334 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABREP78334 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABREP78334 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABREP78334 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.58■□□□□ 0.4
GABREP78334 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 MIR574-201ENST00000385209 96 ntBASIC17.58■□□□□ 0.4
GABREP78334 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 RN7SL606P-201ENST00000472779 293 ntBASIC17.58■□□□□ 0.4
GABREP78334 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.58■□□□□ 0.4
GABREP78334 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 AP005901.3-202ENST00000581653 237 ntBASIC17.58■□□□□ 0.4
GABREP78334 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.58■□□□□ 0.4
GABREP78334 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.58■□□□□ 0.4
GABREP78334 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABREP78334 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABREP78334 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
GABREP78334 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
GABREP78334 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
GABREP78334 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.58■□□□□ 0.4
GABREP78334 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.57■□□□□ 0.4
GABREP78334 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GABREP78334 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GABREP78334 FAM197Y8-203ENST00000450145 560 ntBASIC17.57■□□□□ 0.4
GABREP78334 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.57■□□□□ 0.4
GABREP78334 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.57■□□□□ 0.4
GABREP78334 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.57■□□□□ 0.4
GABREP78334 AC011840.4-201ENST00000578471 627 ntBASIC17.57■□□□□ 0.4
GABREP78334 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.57■□□□□ 0.4
GABREP78334 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.57■□□□□ 0.4
GABREP78334 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.57■□□□□ 0.4
GABREP78334 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
GABREP78334 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
GABREP78334 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.57■□□□□ 0.4
GABREP78334 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
GABREP78334 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
GABREP78334 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.56■□□□□ 0.4
GABREP78334 AL353692.3-201ENST00000407031 1396 ntBASIC17.56■□□□□ 0.4
GABREP78334 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.56■□□□□ 0.4
GABREP78334 AC006333.2-201ENST00000607957 2099 ntBASIC17.56■□□□□ 0.4
GABREP78334 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 AC091607.1-201ENST00000490318 1060 ntBASIC17.56■□□□□ 0.4
GABREP78334 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.56■□□□□ 0.4
GABREP78334 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.56■□□□□ 0.4
GABREP78334 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.56■□□□□ 0.4
GABREP78334 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.56■□□□□ 0.4
GABREP78334 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.56■□□□□ 0.4
GABREP78334 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
GABREP78334 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC17.55■□□□□ 0.4
GABREP78334 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
GABREP78334 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
GABREP78334 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms