Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PMS1P54277 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
PMS1P54277 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
PMS1P54277 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.38■□□□□ 0.85
PMS1P54277 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.38■□□□□ 0.85
PMS1P54277 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 FITM1-202ENST00000559294 800 ntBASIC20.38■□□□□ 0.85
PMS1P54277 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.38■□□□□ 0.85
PMS1P54277 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
PMS1P54277 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.38■□□□□ 0.85
PMS1P54277 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PMS1P54277 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.37■□□□□ 0.85
PMS1P54277 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.37■□□□□ 0.85
PMS1P54277 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PMS1P54277 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.37■□□□□ 0.85
PMS1P54277 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 MIR718-201ENST00000390190 70 ntBASIC20.37■□□□□ 0.85
PMS1P54277 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC20.37■□□□□ 0.85
PMS1P54277 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC20.37■□□□□ 0.85
PMS1P54277 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.37■□□□□ 0.85
PMS1P54277 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PMS1P54277 AL353719.1-201ENST00000566847 864 ntBASIC20.37■□□□□ 0.85
PMS1P54277 MIR4785-201ENST00000585005 73 ntBASIC20.37■□□□□ 0.85
PMS1P54277 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.37■□□□□ 0.85
PMS1P54277 AC008764.6-201ENST00000595909 2069 ntBASIC20.37■□□□□ 0.85
PMS1P54277 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.37■□□□□ 0.85
PMS1P54277 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
PMS1P54277 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.37■□□□□ 0.85
PMS1P54277 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
PMS1P54277 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PMS1P54277 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
PMS1P54277 AC092338.2-201ENST00000568827 1415 ntBASIC20.36■□□□□ 0.85
PMS1P54277 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PMS1P54277 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 REXO1L9P-201ENST00000604264 2108 ntBASIC20.36■□□□□ 0.85
PMS1P54277 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.36■□□□□ 0.85
PMS1P54277 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 INGX-201ENST00000359239 846 ntBASIC20.36■□□□□ 0.85
PMS1P54277 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.36■□□□□ 0.85
PMS1P54277 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PMS1P54277 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PMS1P54277 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.36■□□□□ 0.85
PMS1P54277 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PMS1P54277 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.36■□□□□ 0.85
PMS1P54277 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 AC020763.4-201ENST00000623414 4170 ntBASIC20.35■□□□□ 0.85
PMS1P54277 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.35■□□□□ 0.85
PMS1P54277 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS1P54277 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.35■□□□□ 0.85
PMS1P54277 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 MIR1238-201ENST00000408483 83 ntBASIC20.35■□□□□ 0.85
PMS1P54277 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS1P54277 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.35■□□□□ 0.85
PMS1P54277 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PMS1P54277 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.35■□□□□ 0.85
PMS1P54277 CR769767.2-201ENST00000622735 460 ntBASIC20.35■□□□□ 0.85
PMS1P54277 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
PMS1P54277 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms