Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.36■□□□□ 0.85
ATN1P54259 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 LINC01521-201ENST00000504184 1943 ntBASIC20.35■□□□□ 0.85
ATN1P54259 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATN1P54259 RPSAP43-201ENST00000402237 625 ntBASIC20.35■□□□□ 0.85
ATN1P54259 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
ATN1P54259 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.35■□□□□ 0.85
ATN1P54259 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 IGHV3-22-201ENST00000520721 359 ntBASIC20.35■□□□□ 0.85
ATN1P54259 AC145285.3-201ENST00000564603 959 ntBASIC20.35■□□□□ 0.85
ATN1P54259 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC20.35■□□□□ 0.85
ATN1P54259 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.35■□□□□ 0.85
ATN1P54259 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ATN1P54259 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.35■□□□□ 0.85
ATN1P54259 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ATN1P54259 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.35■□□□□ 0.85
ATN1P54259 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
ATN1P54259 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATN1P54259 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ATN1P54259 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC20.34■□□□□ 0.85
ATN1P54259 RBM17P3-201ENST00000417687 1192 ntBASIC20.34■□□□□ 0.85
ATN1P54259 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.34■□□□□ 0.85
ATN1P54259 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.34■□□□□ 0.85
ATN1P54259 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
ATN1P54259 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.34■□□□□ 0.85
ATN1P54259 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
ATN1P54259 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ATN1P54259 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATN1P54259 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATN1P54259 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.33■□□□□ 0.85
ATN1P54259 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATN1P54259 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ATN1P54259 GPX1P2-201ENST00000429271 606 ntBASIC20.33■□□□□ 0.85
ATN1P54259 RPS2P1-201ENST00000434010 821 ntBASIC20.33■□□□□ 0.85
ATN1P54259 AC092910.1-201ENST00000482027 1129 ntBASIC20.33■□□□□ 0.85
ATN1P54259 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.33■□□□□ 0.85
ATN1P54259 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.33■□□□□ 0.85
ATN1P54259 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.33■□□□□ 0.85
ATN1P54259 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.33■□□□□ 0.85
ATN1P54259 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.33■□□□□ 0.85
ATN1P54259 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC20.33■□□□□ 0.85
ATN1P54259 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.33■□□□□ 0.85
ATN1P54259 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.33■□□□□ 0.85
ATN1P54259 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.33■□□□□ 0.85
ATN1P54259 FAM197Y3-203ENST00000618346 717 ntBASIC20.33■□□□□ 0.85
ATN1P54259 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
ATN1P54259 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ATN1P54259 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATN1P54259 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
ATN1P54259 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.33■□□□□ 0.84
ATN1P54259 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
ATN1P54259 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.33■□□□□ 0.84
ATN1P54259 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
ATN1P54259 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATN1P54259 AL137060.1-201ENST00000618151 2648 ntBASIC20.33■□□□□ 0.84
ATN1P54259 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ATN1P54259 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC20.33■□□□□ 0.84
ATN1P54259 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.32■□□□□ 0.84
ATN1P54259 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
ATN1P54259 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ATN1P54259 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 AC112482.1-201ENST00000492080 688 ntBASIC20.32■□□□□ 0.84
ATN1P54259 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.32■□□□□ 0.84
ATN1P54259 AC021087.4-201ENST00000563761 564 ntBASIC20.32■□□□□ 0.84
ATN1P54259 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC20.32■□□□□ 0.84
ATN1P54259 AC022726.2-201ENST00000634673 547 ntBASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms