Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 AC253576.1-201ENST00000511645 1156 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 ACTR6P1-201ENST00000514311 1104 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 AL031058.1-201ENST00000561592 888 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC18.41■□□□□ 0.54
NUBP1P53384 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 AL096865.1-201ENST00000606796 927 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.41■□□□□ 0.54
NUBP1P53384 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.41■□□□□ 0.54
NUBP1P53384 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.41■□□□□ 0.54
NUBP1P53384 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC18.41■□□□□ 0.54
NUBP1P53384 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.41■□□□□ 0.54
NUBP1P53384 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
NUBP1P53384 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.41■□□□□ 0.54
NUBP1P53384 AP005212.1-201ENST00000581547 1997 ntBASIC18.41■□□□□ 0.54
NUBP1P53384 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.4■□□□□ 0.54
NUBP1P53384 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 AC233723.2-201ENST00000623798 2106 ntBASIC18.4■□□□□ 0.54
NUBP1P53384 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
NUBP1P53384 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.4■□□□□ 0.54
NUBP1P53384 CNN2P11-201ENST00000429351 262 ntBASIC18.4■□□□□ 0.54
NUBP1P53384 AC007967.2-201ENST00000432613 625 ntBASIC18.4■□□□□ 0.54
NUBP1P53384 MTND2P25-201ENST00000449028 610 ntBASIC18.4■□□□□ 0.54
NUBP1P53384 LHX6-205ENST00000464484 666 ntTSL 2 BASIC18.4■□□□□ 0.54
NUBP1P53384 QTRT2-209ENST00000479882 1196 ntTSL 2 BASIC18.4■□□□□ 0.54
NUBP1P53384 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.4■□□□□ 0.54
NUBP1P53384 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.4■□□□□ 0.54
NUBP1P53384 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.4■□□□□ 0.54
NUBP1P53384 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC18.4■□□□□ 0.54
NUBP1P53384 AC011467.2-201ENST00000598425 242 ntBASIC18.4■□□□□ 0.54
NUBP1P53384 MIR1199-201ENST00000621445 119 ntBASIC18.4■□□□□ 0.54
NUBP1P53384 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.4■□□□□ 0.54
NUBP1P53384 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
NUBP1P53384 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
NUBP1P53384 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NUBP1P53384 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
NUBP1P53384 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.39■□□□□ 0.53
NUBP1P53384 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.39■□□□□ 0.53
NUBP1P53384 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
NUBP1P53384 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
NUBP1P53384 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC18.39■□□□□ 0.53
NUBP1P53384 AC009947.1-201ENST00000444350 727 ntBASIC18.39■□□□□ 0.53
NUBP1P53384 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
NUBP1P53384 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.39■□□□□ 0.53
NUBP1P53384 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.39■□□□□ 0.53
NUBP1P53384 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.39■□□□□ 0.53
NUBP1P53384 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC18.39■□□□□ 0.53
NUBP1P53384 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC18.39■□□□□ 0.53
NUBP1P53384 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
NUBP1P53384 AC002310.6-201ENST00000624451 1377 ntBASIC18.39■□□□□ 0.53
NUBP1P53384 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.39■□□□□ 0.53
NUBP1P53384 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
NUBP1P53384 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
NUBP1P53384 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
NUBP1P53384 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
NUBP1P53384 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
NUBP1P53384 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUBP1P53384 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
NUBP1P53384 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
NUBP1P53384 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.38■□□□□ 0.53
NUBP1P53384 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.38■□□□□ 0.53
NUBP1P53384 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NUBP1P53384 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
NUBP1P53384 LAGE3P1-201ENST00000425356 484 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.38■□□□□ 0.53
NUBP1P53384 AC113404.2-201ENST00000507884 177 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 SETP12-201ENST00000514068 805 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.38■□□□□ 0.53
NUBP1P53384 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC18.38■□□□□ 0.53
NUBP1P53384 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC18.38■□□□□ 0.53
NUBP1P53384 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC18.38■□□□□ 0.53
NUBP1P53384 AC090079.2-201ENST00000575289 768 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.38■□□□□ 0.53
NUBP1P53384 MIR4469-201ENST00000583919 79 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.38■□□□□ 0.53
NUBP1P53384 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.38■□□□□ 0.53
NUBP1P53384 AC005336.2-201ENST00000593183 939 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 AC068313.1-201ENST00000604028 1008 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 AC005972.3-201ENST00000606304 481 ntBASIC18.38■□□□□ 0.53
NUBP1P53384 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms