Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 MIR1199-201ENST00000621445 119 ntBASIC20.66■□□□□ 0.9
BRCA2P51587 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.66■□□□□ 0.9
BRCA2P51587 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BRCA2P51587 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
BRCA2P51587 AC104390.1-201ENST00000555663 520 ntBASIC20.66■□□□□ 0.9
BRCA2P51587 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.66■□□□□ 0.9
BRCA2P51587 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRCA2P51587 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRCA2P51587 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.65■□□□□ 0.9
BRCA2P51587 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.65■□□□□ 0.9
BRCA2P51587 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 UNC93B6-202ENST00000528242 690 ntBASIC20.65■□□□□ 0.9
BRCA2P51587 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
BRCA2P51587 INTS4P1-201ENST00000438455 1935 ntBASIC20.65■□□□□ 0.9
BRCA2P51587 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BRCA2P51587 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.65■□□□□ 0.9
BRCA2P51587 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
BRCA2P51587 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 RBSN-204ENST00000449050 903 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC20.65■□□□□ 0.9
BRCA2P51587 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.65■□□□□ 0.9
BRCA2P51587 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC20.65■□□□□ 0.9
BRCA2P51587 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.65■□□□□ 0.9
BRCA2P51587 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC20.65■□□□□ 0.9
BRCA2P51587 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
BRCA2P51587 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
BRCA2P51587 RBM17P3-201ENST00000417687 1192 ntBASIC20.65■□□□□ 0.9
BRCA2P51587 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 AC092910.1-201ENST00000482027 1129 ntBASIC20.65■□□□□ 0.9
BRCA2P51587 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 AC024563.2-201ENST00000603282 481 ntBASIC20.65■□□□□ 0.9
BRCA2P51587 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.65■□□□□ 0.9
BRCA2P51587 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRCA2P51587 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRCA2P51587 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
BRCA2P51587 TP73-AS1-210ENST00000637775 1455 ntBASIC20.64■□□□□ 0.9
BRCA2P51587 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
BRCA2P51587 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRCA2P51587 MTDHP3-201ENST00000594186 672 ntBASIC20.64■□□□□ 0.89
BRCA2P51587 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRCA2P51587 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
BRCA2P51587 AC006333.2-201ENST00000607957 2099 ntBASIC20.64■□□□□ 0.89
BRCA2P51587 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRCA2P51587 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.64■□□□□ 0.89
BRCA2P51587 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
BRCA2P51587 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC20.64■□□□□ 0.89
BRCA2P51587 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.64■□□□□ 0.89
BRCA2P51587 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.64■□□□□ 0.89
BRCA2P51587 AC106028.4-201ENST00000614509 607 ntBASIC20.64■□□□□ 0.89
BRCA2P51587 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
BRCA2P51587 AC020907.5-201ENST00000624372 1936 ntBASIC20.64■□□□□ 0.89
BRCA2P51587 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
BRCA2P51587 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.64■□□□□ 0.89
BRCA2P51587 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC20.63■□□□□ 0.89
BRCA2P51587 MIR4469-201ENST00000583919 79 ntBASIC20.63■□□□□ 0.89
BRCA2P51587 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
BRCA2P51587 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
BRCA2P51587 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.63■□□□□ 0.89
BRCA2P51587 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC20.63■□□□□ 0.89
BRCA2P51587 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC20.63■□□□□ 0.89
BRCA2P51587 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
BRCA2P51587 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.63■□□□□ 0.89
BRCA2P51587 RCC2P3-201ENST00000418112 1537 ntBASIC20.63■□□□□ 0.89
BRCA2P51587 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
BRCA2P51587 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.62■□□□□ 0.89
BRCA2P51587 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms