Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH3P22223 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.13■□□□□ 0.49
CDH3P22223 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH3P22223 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
CDH3P22223 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CDH3P22223 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
CDH3P22223 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 FP475955.4-201ENST00000623131 1990 ntBASIC18.12■□□□□ 0.49
CDH3P22223 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 AL023284.2-201ENST00000405850 579 ntBASIC18.12■□□□□ 0.49
CDH3P22223 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 AC092647.4-201ENST00000457211 535 ntBASIC18.12■□□□□ 0.49
CDH3P22223 WWOX-216ENST00000569818 525 ntBASIC18.12■□□□□ 0.49
CDH3P22223 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.12■□□□□ 0.49
CDH3P22223 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH3P22223 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 NTF6B-201ENST00000591913 560 ntBASIC18.12■□□□□ 0.49
CDH3P22223 CR769767.2-201ENST00000622735 460 ntBASIC18.12■□□□□ 0.49
CDH3P22223 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
CDH3P22223 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.12■□□□□ 0.49
CDH3P22223 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDH3P22223 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.12■□□□□ 0.49
CDH3P22223 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH3P22223 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH3P22223 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 TSPY5P-201ENST00000426936 936 ntBASIC18.11■□□□□ 0.49
CDH3P22223 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 AC022616.7-201ENST00000525383 220 ntBASIC18.11■□□□□ 0.49
CDH3P22223 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 AC011558.1-201ENST00000623459 338 ntBASIC18.11■□□□□ 0.49
CDH3P22223 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH3P22223 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CDH3P22223 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH3P22223 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.11■□□□□ 0.49
CDH3P22223 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.11■□□□□ 0.49
CDH3P22223 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CDH3P22223 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
CDH3P22223 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH3P22223 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH3P22223 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
CDH3P22223 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.1■□□□□ 0.49
CDH3P22223 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CDH3P22223 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms