Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.32■□□□□ 0.36
TPRP12270 PMS2P4-201ENST00000412466 1052 ntBASIC17.32■□□□□ 0.36
TPRP12270 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17.32■□□□□ 0.36
TPRP12270 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
TPRP12270 PLK5-205ENST00000642079 1969 ntBASIC17.32■□□□□ 0.36
TPRP12270 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TPRP12270 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TPRP12270 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC17.31■□□□□ 0.36
TPRP12270 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TPRP12270 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 TFAMP1-201ENST00000412727 736 ntBASIC17.31■□□□□ 0.36
TPRP12270 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.31■□□□□ 0.36
TPRP12270 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.31■□□□□ 0.36
TPRP12270 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC17.31■□□□□ 0.36
TPRP12270 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 AC018845.2-201ENST00000568326 409 ntBASIC17.31■□□□□ 0.36
TPRP12270 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.31■□□□□ 0.36
TPRP12270 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC17.31■□□□□ 0.36
TPRP12270 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.31■□□□□ 0.36
TPRP12270 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 TP73-AS1-210ENST00000637775 1455 ntBASIC17.31■□□□□ 0.36
TPRP12270 AC121338.2-201ENST00000622535 1744 ntBASIC17.31■□□□□ 0.36
TPRP12270 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.31■□□□□ 0.36
TPRP12270 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 AL139288.1-201ENST00000623748 933 ntBASIC17.31■□□□□ 0.36
TPRP12270 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 HOXB1-202ENST00000577092 1414 ntBASIC17.31■□□□□ 0.36
TPRP12270 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
TPRP12270 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TPRP12270 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.3■□□□□ 0.36
TPRP12270 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.3■□□□□ 0.36
TPRP12270 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPRP12270 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 SLC25A6P5-201ENST00000435663 894 ntBASIC17.3■□□□□ 0.36
TPRP12270 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.3■□□□□ 0.36
TPRP12270 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.3■□□□□ 0.36
TPRP12270 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.3■□□□□ 0.36
TPRP12270 AC084346.2-201ENST00000607097 949 ntBASIC17.3■□□□□ 0.36
TPRP12270 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TPRP12270 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPRP12270 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TPRP12270 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.3■□□□□ 0.36
TPRP12270 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.3■□□□□ 0.36
TPRP12270 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TPRP12270 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TPRP12270 MIR661-201ENST00000384842 89 ntBASIC17.3■□□□□ 0.36
TPRP12270 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TPRP12270 AC108751.1-201ENST00000490852 363 ntBASIC17.3■□□□□ 0.36
TPRP12270 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TPRP12270 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.3■□□□□ 0.36
TPRP12270 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TPRP12270 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.3■□□□□ 0.36
TPRP12270 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
TPRP12270 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPRP12270 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPRP12270 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRP12270 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TPRP12270 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TPRP12270 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.29■□□□□ 0.36
TPRP12270 ABCD1P5-201ENST00000445663 754 ntBASIC17.29■□□□□ 0.36
TPRP12270 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.29■□□□□ 0.36
TPRP12270 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.29■□□□□ 0.36
TPRP12270 SNX12-206ENST00000622259 661 ntTSL 5 BASIC17.29■□□□□ 0.36
TPRP12270 AL513210.1-201ENST00000629608 234 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms