Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.8■□□□□ 0.28
HMGN1P05114 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGN1P05114 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGN1P05114 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGN1P05114 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.8■□□□□ 0.28
HMGN1P05114 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.8■□□□□ 0.28
HMGN1P05114 ESPNP-201ENST00000270691 2015 ntBASIC16.8■□□□□ 0.28
HMGN1P05114 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGN1P05114 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.79■□□□□ 0.28
HMGN1P05114 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
HMGN1P05114 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.79■□□□□ 0.28
HMGN1P05114 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
HMGN1P05114 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
HMGN1P05114 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 AP003097.1-201ENST00000530657 1135 ntBASIC16.79■□□□□ 0.28
HMGN1P05114 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC16.79■□□□□ 0.28
HMGN1P05114 AC069544.1-201ENST00000609399 999 ntBASIC16.79■□□□□ 0.28
HMGN1P05114 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 MYLKP1-201ENST00000509077 1580 ntBASIC16.79■□□□□ 0.28
HMGN1P05114 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGN1P05114 AC138028.4-201ENST00000564984 1845 ntBASIC16.79■□□□□ 0.28
HMGN1P05114 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGN1P05114 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGN1P05114 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGN1P05114 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
HMGN1P05114 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
HMGN1P05114 AC008556.1-201ENST00000610908 2040 ntBASIC16.79■□□□□ 0.28
HMGN1P05114 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGN1P05114 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 AL356309.3-201ENST00000624132 1934 ntBASIC16.78■□□□□ 0.28
HMGN1P05114 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGN1P05114 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.78■□□□□ 0.28
HMGN1P05114 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HMGN1P05114 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGN1P05114 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HMGN1P05114 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGN1P05114 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGN1P05114 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMGN1P05114 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
HMGN1P05114 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
HMGN1P05114 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGN1P05114 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGN1P05114 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGN1P05114 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMGN1P05114 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGN1P05114 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
HMGN1P05114 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGN1P05114 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGN1P05114 HTR7P1-201ENST00000538670 1336 ntBASIC16.77■□□□□ 0.28
HMGN1P05114 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGN1P05114 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
HMGN1P05114 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
HMGN1P05114 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.77■□□□□ 0.28
HMGN1P05114 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC16.77■□□□□ 0.28
HMGN1P05114 KRASP1-201ENST00000407852 552 ntBASIC16.77■□□□□ 0.28
HMGN1P05114 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
HMGN1P05114 AC239809.2-201ENST00000415381 517 ntBASIC16.77■□□□□ 0.28
HMGN1P05114 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
HMGN1P05114 KRT18P41-201ENST00000518924 1277 ntBASIC16.77■□□□□ 0.28
HMGN1P05114 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.77■□□□□ 0.28
HMGN1P05114 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms