Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
APOEP02649 AK4P3-201ENST00000418260 669 ntBASIC19.39■□□□□ 0.69
APOEP02649 AC117947.1-201ENST00000427448 529 ntBASIC19.39■□□□□ 0.69
APOEP02649 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.39■□□□□ 0.69
APOEP02649 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.39■□□□□ 0.69
APOEP02649 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.39■□□□□ 0.69
APOEP02649 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.39■□□□□ 0.69
APOEP02649 AC006011.2-201ENST00000621313 1158 ntBASIC19.39■□□□□ 0.69
APOEP02649 AL023973.1-201ENST00000624619 620 ntBASIC19.39■□□□□ 0.69
APOEP02649 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APOEP02649 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.39■□□□□ 0.69
APOEP02649 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
APOEP02649 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.39■□□□□ 0.69
APOEP02649 AC093525.10-201ENST00000625130 1569 ntBASIC19.39■□□□□ 0.69
APOEP02649 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
APOEP02649 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.39■□□□□ 0.69
APOEP02649 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOEP02649 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC19.39■□□□□ 0.69
APOEP02649 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
APOEP02649 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.39■□□□□ 0.69
APOEP02649 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 BCL2-203ENST00000589955 5011 ntBASIC19.38■□□□□ 0.69
APOEP02649 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
APOEP02649 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
APOEP02649 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 MIR564-202ENST00000385049 94 ntBASIC19.38■□□□□ 0.69
APOEP02649 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.38■□□□□ 0.69
APOEP02649 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC19.38■□□□□ 0.69
APOEP02649 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 YBX1P2-201ENST00000489612 999 ntBASIC19.38■□□□□ 0.69
APOEP02649 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
APOEP02649 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
APOEP02649 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.38■□□□□ 0.69
APOEP02649 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.37■□□□□ 0.69
APOEP02649 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.37■□□□□ 0.69
APOEP02649 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
APOEP02649 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.37■□□□□ 0.69
APOEP02649 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.37■□□□□ 0.69
APOEP02649 AC104076.2-201ENST00000448912 469 ntBASIC19.37■□□□□ 0.69
APOEP02649 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.37■□□□□ 0.69
APOEP02649 AL049597.2-201ENST00000565575 961 ntBASIC19.37■□□□□ 0.69
APOEP02649 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.37■□□□□ 0.69
APOEP02649 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.37■□□□□ 0.69
APOEP02649 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.37■□□□□ 0.69
APOEP02649 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
APOEP02649 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
APOEP02649 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.37■□□□□ 0.69
APOEP02649 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
APOEP02649 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.36■□□□□ 0.69
APOEP02649 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.36■□□□□ 0.69
APOEP02649 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
APOEP02649 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
APOEP02649 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.36■□□□□ 0.69
APOEP02649 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.36■□□□□ 0.69
APOEP02649 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.36■□□□□ 0.69
APOEP02649 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.36■□□□□ 0.69
APOEP02649 DUX4L26-201ENST00000489078 1255 ntBASIC19.36■□□□□ 0.69
APOEP02649 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.36■□□□□ 0.69
APOEP02649 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
APOEP02649 Z98044.1-201ENST00000632503 1764 ntBASIC19.36■□□□□ 0.69
APOEP02649 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
APOEP02649 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
APOEP02649 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms