Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.32■□□□□ 0.68
LMNAP02545 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.32■□□□□ 0.68
LMNAP02545 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.32■□□□□ 0.68
LMNAP02545 AL160237.2-201ENST00000556165 472 ntBASIC19.32■□□□□ 0.68
LMNAP02545 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LMNAP02545 AC117500.6-201ENST00000624871 588 ntBASIC19.32■□□□□ 0.68
LMNAP02545 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.32■□□□□ 0.68
LMNAP02545 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.32■□□□□ 0.68
LMNAP02545 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
LMNAP02545 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LMNAP02545 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.32■□□□□ 0.68
LMNAP02545 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LMNAP02545 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
LMNAP02545 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
LMNAP02545 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC19.31■□□□□ 0.68
LMNAP02545 NUS1P1-201ENST00000446295 882 ntBASIC19.31■□□□□ 0.68
LMNAP02545 TSSC2-201ENST00000450217 709 ntBASIC19.31■□□□□ 0.68
LMNAP02545 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.31■□□□□ 0.68
LMNAP02545 AP003041.3-201ENST00000527151 707 ntBASIC19.31■□□□□ 0.68
LMNAP02545 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.31■□□□□ 0.68
LMNAP02545 AL031008.1-201ENST00000619963 541 ntBASIC19.31■□□□□ 0.68
LMNAP02545 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.31■□□□□ 0.68
LMNAP02545 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
LMNAP02545 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
LMNAP02545 AL390961.4-201ENST00000623958 2535 ntBASIC19.3■□□□□ 0.68
LMNAP02545 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
LMNAP02545 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.3■□□□□ 0.68
LMNAP02545 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.3■□□□□ 0.68
LMNAP02545 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 EMBP1-201ENST00000458200 901 ntBASIC19.3■□□□□ 0.68
LMNAP02545 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
LMNAP02545 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.3■□□□□ 0.68
LMNAP02545 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.3■□□□□ 0.68
LMNAP02545 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.3■□□□□ 0.68
LMNAP02545 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 KRT8P17-201ENST00000453110 1448 ntBASIC19.3■□□□□ 0.68
LMNAP02545 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 AL032819.2-201ENST00000624543 2162 ntBASIC19.3■□□□□ 0.68
LMNAP02545 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
LMNAP02545 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
LMNAP02545 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 TFP1-202ENST00000475455 1573 ntBASIC19.29■□□□□ 0.68
LMNAP02545 AC116351.2-201ENST00000606540 1585 ntBASIC19.29■□□□□ 0.68
LMNAP02545 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 AL645929.1-201ENST00000420084 975 ntBASIC19.29■□□□□ 0.68
LMNAP02545 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.29■□□□□ 0.68
LMNAP02545 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.29■□□□□ 0.68
LMNAP02545 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 NEK4P2-201ENST00000580004 1012 ntBASIC19.29■□□□□ 0.68
LMNAP02545 AC104692.2-201ENST00000603054 253 ntBASIC19.29■□□□□ 0.68
LMNAP02545 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LMNAP02545 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.29■□□□□ 0.68
LMNAP02545 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms