Protein–RNA interactions for Protein: O95704

APBB3, Amyloid-beta A4 precursor protein-binding family B member 3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3O95704 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.53■□□□□ 0.56
APBB3O95704 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.53■□□□□ 0.56
APBB3O95704 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APBB3O95704 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
APBB3O95704 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
APBB3O95704 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
APBB3O95704 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
APBB3O95704 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.56
APBB3O95704 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC18.52■□□□□ 0.56
APBB3O95704 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
APBB3O95704 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.52■□□□□ 0.56
APBB3O95704 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 PMS2P1-201ENST00000431037 1228 ntBASIC18.52■□□□□ 0.56
APBB3O95704 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
APBB3O95704 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
APBB3O95704 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.52■□□□□ 0.55
APBB3O95704 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
APBB3O95704 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APBB3O95704 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APBB3O95704 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
APBB3O95704 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
APBB3O95704 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
APBB3O95704 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.51■□□□□ 0.55
APBB3O95704 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.51■□□□□ 0.55
APBB3O95704 AC091607.1-201ENST00000490318 1060 ntBASIC18.51■□□□□ 0.55
APBB3O95704 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.51■□□□□ 0.55
APBB3O95704 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.51■□□□□ 0.55
APBB3O95704 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 AL773604.1-201ENST00000617417 272 ntBASIC18.51■□□□□ 0.55
APBB3O95704 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
APBB3O95704 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
APBB3O95704 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
APBB3O95704 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.51■□□□□ 0.55
APBB3O95704 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
APBB3O95704 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.5■□□□□ 0.55
APBB3O95704 AC073130.3-201ENST00000624389 2278 ntBASIC18.5■□□□□ 0.55
APBB3O95704 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.5■□□□□ 0.55
APBB3O95704 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.5■□□□□ 0.55
APBB3O95704 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.5■□□□□ 0.55
APBB3O95704 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.5■□□□□ 0.55
APBB3O95704 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC18.5■□□□□ 0.55
APBB3O95704 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.5■□□□□ 0.55
APBB3O95704 AL671883.3-201ENST00000603274 991 ntBASIC18.5■□□□□ 0.55
APBB3O95704 TP73-AS1-207ENST00000624167 988 ntBASIC18.5■□□□□ 0.55
APBB3O95704 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.5■□□□□ 0.55
APBB3O95704 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
APBB3O95704 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
APBB3O95704 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
APBB3O95704 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.49■□□□□ 0.55
APBB3O95704 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
APBB3O95704 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
APBB3O95704 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
APBB3O95704 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.49■□□□□ 0.55
APBB3O95704 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
APBB3O95704 FAM197Y8-203ENST00000450145 560 ntBASIC18.49■□□□□ 0.55
APBB3O95704 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.49■□□□□ 0.55
APBB3O95704 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC18.49■□□□□ 0.55
APBB3O95704 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.49■□□□□ 0.55
APBB3O95704 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.49■□□□□ 0.55
APBB3O95704 AC068587.9-201ENST00000641814 219 ntBASIC18.49■□□□□ 0.55
APBB3O95704 AF228730.7-201ENST00000641842 219 ntBASIC18.49■□□□□ 0.55
APBB3O95704 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
APBB3O95704 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC18.49■□□□□ 0.55
APBB3O95704 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.49■□□□□ 0.55
APBB3O95704 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.49■□□□□ 0.55
APBB3O95704 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
APBB3O95704 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
APBB3O95704 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms