Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 INIP-202ENST00000374236 874 ntTSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 AC073621.1-201ENST00000392730 636 ntBASIC8.23□□□□□ -1.09
USH2AO75445 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC8.23□□□□□ -1.09
USH2AO75445 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC8.23□□□□□ -1.09
USH2AO75445 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 AC125634.1-201ENST00000438758 1403 ntBASIC8.23□□□□□ -1.09
USH2AO75445 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC8.23□□□□□ -1.09
USH2AO75445 TSEN15P1-201ENST00000423257 515 ntBASIC8.23□□□□□ -1.09
USH2AO75445 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC8.23□□□□□ -1.09
USH2AO75445 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 ANKRD20A8P-203ENST00000641373 517 ntBASIC8.23□□□□□ -1.09
USH2AO75445 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC8.23□□□□□ -1.09
USH2AO75445 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 PMS2P4-201ENST00000412466 1052 ntBASIC8.23□□□□□ -1.09
USH2AO75445 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC8.23□□□□□ -1.09
USH2AO75445 AQP6-203ENST00000551733 849 ntTSL 3 BASIC8.23□□□□□ -1.09
USH2AO75445 RNF151-202ENST00000569210 853 ntTSL 2 BASIC8.23□□□□□ -1.09
USH2AO75445 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC8.23□□□□□ -1.09
USH2AO75445 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
USH2AO75445 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 AL513210.1-201ENST00000629608 234 ntBASIC8.22□□□□□ -1.09
USH2AO75445 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 REEP1-209ENST00000541910 969 ntTSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 NKAPP1-205ENST00000585790 367 ntBASIC8.22□□□□□ -1.09
USH2AO75445 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC8.22□□□□□ -1.09
USH2AO75445 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC8.22□□□□□ -1.09
USH2AO75445 YTHDF3-AS1-201ENST00000603538 718 ntBASIC8.22□□□□□ -1.09
USH2AO75445 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 AL512353.2-201ENST00000448759 1962 ntBASIC8.22□□□□□ -1.09
USH2AO75445 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC8.22□□□□□ -1.09
USH2AO75445 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC8.22□□□□□ -1.09
USH2AO75445 AC104390.1-201ENST00000555663 520 ntBASIC8.22□□□□□ -1.09
USH2AO75445 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC8.22□□□□□ -1.09
USH2AO75445 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC8.22□□□□□ -1.09
USH2AO75445 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
USH2AO75445 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC8.21□□□□□ -1.09
USH2AO75445 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC8.21□□□□□ -1.09
USH2AO75445 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
USH2AO75445 GRAP-202ENST00000395635 834 ntTSL 2 BASIC8.21□□□□□ -1.09
USH2AO75445 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms