Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC17.58■□□□□ 0.4
SCN2BO60939 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SCN2BO60939 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
SCN2BO60939 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN2BO60939 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SCN2BO60939 PCDHB18P-201ENST00000524813 2368 ntBASIC17.58■□□□□ 0.4
SCN2BO60939 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN2BO60939 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN2BO60939 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 ESPNP-201ENST00000270691 2015 ntBASIC17.57■□□□□ 0.4
SCN2BO60939 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 AC067852.2-201ENST00000590513 2313 ntBASIC17.57■□□□□ 0.4
SCN2BO60939 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.57■□□□□ 0.4
SCN2BO60939 FAM201B-201ENST00000458407 597 ntBASIC17.57■□□□□ 0.4
SCN2BO60939 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SCN2BO60939 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.57■□□□□ 0.4
SCN2BO60939 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.57■□□□□ 0.4
SCN2BO60939 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
SCN2BO60939 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN2BO60939 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN2BO60939 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SCN2BO60939 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.57■□□□□ 0.4
SCN2BO60939 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 MIR564-202ENST00000385049 94 ntBASIC17.56■□□□□ 0.4
SCN2BO60939 AL023284.2-201ENST00000405850 579 ntBASIC17.56■□□□□ 0.4
SCN2BO60939 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.56■□□□□ 0.4
SCN2BO60939 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.56■□□□□ 0.4
SCN2BO60939 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.56■□□□□ 0.4
SCN2BO60939 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 CD177P1-201ENST00000606252 935 ntBASIC17.56■□□□□ 0.4
SCN2BO60939 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.56■□□□□ 0.4
SCN2BO60939 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SCN2BO60939 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SCN2BO60939 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC17.55■□□□□ 0.4
SCN2BO60939 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SCN2BO60939 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SCN2BO60939 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SCN2BO60939 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SCN2BO60939 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms