Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 GPR32P1-201ENST00000601788 811 ntBASIC17.47■□□□□ 0.39
URB1O60287 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.47■□□□□ 0.39
URB1O60287 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
URB1O60287 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
URB1O60287 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
URB1O60287 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.46■□□□□ 0.39
URB1O60287 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 AP003733.1-201ENST00000491725 852 ntBASIC17.46■□□□□ 0.39
URB1O60287 GUSBP12-201ENST00000513727 720 ntBASIC17.46■□□□□ 0.39
URB1O60287 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.46■□□□□ 0.39
URB1O60287 BNIP3P18-201ENST00000593976 575 ntBASIC17.46■□□□□ 0.39
URB1O60287 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
URB1O60287 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.46■□□□□ 0.39
URB1O60287 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.46■□□□□ 0.39
URB1O60287 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
URB1O60287 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.46■□□□□ 0.39
URB1O60287 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.46■□□□□ 0.39
URB1O60287 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.46■□□□□ 0.39
URB1O60287 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.46■□□□□ 0.39
URB1O60287 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 IGHGP-201ENST00000390555 1178 ntBASIC17.46■□□□□ 0.39
URB1O60287 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.46■□□□□ 0.39
URB1O60287 SCARNA2-201ENST00000458748 420 ntBASIC17.46■□□□□ 0.39
URB1O60287 AL356488.2-201ENST00000602755 427 ntBASIC17.46■□□□□ 0.39
URB1O60287 AC008608.2-201ENST00000606089 416 ntBASIC17.46■□□□□ 0.39
URB1O60287 MIR7706-201ENST00000613747 67 ntBASIC17.46■□□□□ 0.39
URB1O60287 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.46■□□□□ 0.39
URB1O60287 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
URB1O60287 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.46■□□□□ 0.38
URB1O60287 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.45■□□□□ 0.38
URB1O60287 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.45■□□□□ 0.38
URB1O60287 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.45■□□□□ 0.38
URB1O60287 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.45■□□□□ 0.38
URB1O60287 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.45■□□□□ 0.38
URB1O60287 AC011840.4-201ENST00000578471 627 ntBASIC17.45■□□□□ 0.38
URB1O60287 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
URB1O60287 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.45■□□□□ 0.38
URB1O60287 RPS15-207ENST00000591032 550 ntTSL 3 BASIC17.45■□□□□ 0.38
URB1O60287 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
URB1O60287 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
URB1O60287 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
URB1O60287 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.44■□□□□ 0.38
URB1O60287 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.44■□□□□ 0.38
URB1O60287 AC004967.1-201ENST00000453589 447 ntBASIC17.44■□□□□ 0.38
URB1O60287 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.44■□□□□ 0.38
URB1O60287 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.44■□□□□ 0.38
URB1O60287 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.44■□□□□ 0.38
URB1O60287 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
URB1O60287 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 69.3 ms