Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDH7O60245 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH7O60245 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
PCDH7O60245 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
PCDH7O60245 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.71■□□□□ 0.43
PCDH7O60245 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.71■□□□□ 0.43
PCDH7O60245 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
PCDH7O60245 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.71■□□□□ 0.43
PCDH7O60245 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
PCDH7O60245 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
PCDH7O60245 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
PCDH7O60245 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH7O60245 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
PCDH7O60245 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 AL162741.1-201ENST00000565563 1558 ntBASIC17.7■□□□□ 0.42
PCDH7O60245 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
PCDH7O60245 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PCDH7O60245 SNORA78-201ENST00000459373 127 ntBASIC17.7■□□□□ 0.42
PCDH7O60245 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.7■□□□□ 0.42
PCDH7O60245 MIR4674-201ENST00000582457 87 ntBASIC17.7■□□□□ 0.42
PCDH7O60245 MIR3180-5-201ENST00000583743 153 ntBASIC17.7■□□□□ 0.42
PCDH7O60245 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
PCDH7O60245 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH7O60245 AP000525.1-201ENST00000608286 694 ntBASIC17.7■□□□□ 0.42
PCDH7O60245 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH7O60245 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH7O60245 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.7■□□□□ 0.42
PCDH7O60245 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
PCDH7O60245 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PCDH7O60245 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
PCDH7O60245 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PCDH7O60245 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.69■□□□□ 0.42
PCDH7O60245 AC026471.1-201ENST00000564629 3026 ntBASIC17.69■□□□□ 0.42
PCDH7O60245 AC034236.2-201ENST00000606662 1610 ntBASIC17.69■□□□□ 0.42
PCDH7O60245 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.69■□□□□ 0.42
PCDH7O60245 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH7O60245 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 ABALON-201ENST00000629058 1903 ntBASIC17.69■□□□□ 0.42
PCDH7O60245 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
PCDH7O60245 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.69■□□□□ 0.42
PCDH7O60245 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PCDH7O60245 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PCDH7O60245 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
PCDH7O60245 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.68■□□□□ 0.42
PCDH7O60245 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH7O60245 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.68■□□□□ 0.42
PCDH7O60245 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH7O60245 AP000593.1-201ENST00000393668 712 ntBASIC17.68■□□□□ 0.42
PCDH7O60245 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.68■□□□□ 0.42
PCDH7O60245 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH7O60245 SLC25A1P2-201ENST00000430693 912 ntBASIC17.68■□□□□ 0.42
PCDH7O60245 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 AC036111.1-201ENST00000533973 1582 ntBASIC17.68■□□□□ 0.42
PCDH7O60245 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.68■□□□□ 0.42
PCDH7O60245 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PCDH7O60245 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms