Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 SPDYE13P-201ENST00000445314 798 ntBASIC17.75■□□□□ 0.43
PRICKLE3O43900 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 AC009065.1-201ENST00000564055 1225 ntBASIC17.75■□□□□ 0.43
PRICKLE3O43900 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 AC083849.1-201ENST00000615227 514 ntBASIC17.75■□□□□ 0.43
PRICKLE3O43900 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 WIZP1-201ENST00000531444 2299 ntBASIC17.75■□□□□ 0.43
PRICKLE3O43900 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PRICKLE3O43900 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PRICKLE3O43900 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE3O43900 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE3O43900 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 AL391807.1-203ENST00000604392 2365 ntBASIC17.74■□□□□ 0.43
PRICKLE3O43900 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 AL671277.2-201ENST00000458060 996 ntBASIC17.74■□□□□ 0.43
PRICKLE3O43900 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE3O43900 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE3O43900 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE3O43900 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
PRICKLE3O43900 AC009102.3-201ENST00000623118 1491 ntBASIC17.74■□□□□ 0.43
PRICKLE3O43900 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PRICKLE3O43900 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.73■□□□□ 0.43
PRICKLE3O43900 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
PRICKLE3O43900 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 AC005082.1-201ENST00000413042 2259 ntBASIC17.73■□□□□ 0.43
PRICKLE3O43900 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
PRICKLE3O43900 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.72■□□□□ 0.43
PRICKLE3O43900 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
PRICKLE3O43900 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms