Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1O14646 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
CHD1O14646 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC29.88■■■□□ 2.37
CHD1O14646 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CHD1O14646 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC29.88■■■□□ 2.37
CHD1O14646 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CHD1O14646 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC29.88■■■□□ 2.37
CHD1O14646 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC29.88■■■□□ 2.37
CHD1O14646 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC29.88■■■□□ 2.37
CHD1O14646 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC29.88■■■□□ 2.37
CHD1O14646 AL513190.1-201ENST00000621254 727 ntBASIC29.88■■■□□ 2.37
CHD1O14646 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC29.87■■■□□ 2.37
CHD1O14646 AC097374.2-201ENST00000618617 1306 ntBASIC29.87■■■□□ 2.37
CHD1O14646 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 TP73-202ENST00000354437 2140 ntTSL 5 BASIC29.87■■■□□ 2.37
CHD1O14646 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC29.87■■■□□ 2.37
CHD1O14646 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC29.87■■■□□ 2.37
CHD1O14646 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC29.87■■■□□ 2.37
CHD1O14646 AP000344.2-201ENST00000512987 629 ntBASIC29.87■■■□□ 2.37
CHD1O14646 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC29.87■■■□□ 2.37
CHD1O14646 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC29.87■■■□□ 2.37
CHD1O14646 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC29.87■■■□□ 2.37
CHD1O14646 CD82-202ENST00000342935 967 ntTSL 5 BASIC29.86■■■□□ 2.37
CHD1O14646 AL139400.1-201ENST00000366220 510 ntBASIC29.86■■■□□ 2.37
CHD1O14646 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHD1O14646 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHD1O14646 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC29.86■■■□□ 2.37
CHD1O14646 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC29.86■■■□□ 2.37
CHD1O14646 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
CHD1O14646 AC026310.3-201ENST00000625186 2373 ntBASIC29.86■■■□□ 2.37
CHD1O14646 Z82202.1-201ENST00000623446 1880 ntBASIC29.86■■■□□ 2.37
CHD1O14646 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC29.85■■■□□ 2.37
CHD1O14646 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC29.85■■■□□ 2.37
CHD1O14646 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC29.85■■■□□ 2.37
CHD1O14646 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC29.85■■■□□ 2.37
CHD1O14646 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC29.85■■■□□ 2.37
CHD1O14646 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC29.85■■■□□ 2.37
CHD1O14646 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC29.85■■■□□ 2.37
CHD1O14646 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
CHD1O14646 MSRA-206ENST00000521209 814 ntTSL 3 BASIC29.85■■■□□ 2.37
CHD1O14646 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC29.85■■■□□ 2.37
CHD1O14646 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC29.85■■■□□ 2.37
CHD1O14646 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC29.85■■■□□ 2.37
CHD1O14646 AL035252.4-201ENST00000624174 288 ntBASIC29.85■■■□□ 2.37
CHD1O14646 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC29.84■■■□□ 2.37
CHD1O14646 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC29.84■■■□□ 2.37
CHD1O14646 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC29.84■■■□□ 2.37
CHD1O14646 EP400NL-214ENST00000641289 2402 ntBASIC29.84■■■□□ 2.37
CHD1O14646 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC29.84■■■□□ 2.37
CHD1O14646 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
CHD1O14646 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC29.84■■■□□ 2.37
CHD1O14646 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC29.83■■■□□ 2.37
CHD1O14646 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC29.83■■■□□ 2.37
CHD1O14646 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC29.83■■■□□ 2.37
CHD1O14646 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC29.83■■■□□ 2.37
CHD1O14646 TCAP-202ENST00000578283 583 ntTSL 5 BASIC29.83■■■□□ 2.37
CHD1O14646 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 AC079776.2-201ENST00000641154 1609 ntBASIC29.83■■■□□ 2.37
CHD1O14646 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC29.83■■■□□ 2.37
CHD1O14646 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC29.82■■■□□ 2.37
CHD1O14646 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD1O14646 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD1O14646 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CHD1O14646 CTNS-203ENST00000399306 803 ntTSL 3 BASIC29.82■■■□□ 2.36
CHD1O14646 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC29.82■■■□□ 2.36
CHD1O14646 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC29.82■■■□□ 2.36
CHD1O14646 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC29.82■■■□□ 2.36
CHD1O14646 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC29.82■■■□□ 2.36
CHD1O14646 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC29.82■■■□□ 2.36
CHD1O14646 AC068587.9-201ENST00000641814 219 ntBASIC29.82■■■□□ 2.36
CHD1O14646 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC29.82■■■□□ 2.36
CHD1O14646 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CHD1O14646 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms