Protein–RNA interactions for Protein: A8K7I4

CLCA1, Calcium-activated chloride channel regulator 1, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA1A8K7I4 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 AC004951.3-201ENST00000418645 1148 ntBASIC17.32■□□□□ 0.36
CLCA1A8K7I4 AL160286.2-201ENST00000567150 934 ntBASIC17.32■□□□□ 0.36
CLCA1A8K7I4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLCA1A8K7I4 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 AC097488.1-201ENST00000507834 756 ntBASIC17.31■□□□□ 0.36
CLCA1A8K7I4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 NAPSB-206ENST00000562112 1266 ntBASIC17.31■□□□□ 0.36
CLCA1A8K7I4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 AC130371.2-201ENST00000619443 611 ntBASIC17.31■□□□□ 0.36
CLCA1A8K7I4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLCA1A8K7I4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 TMPOP1-202ENST00000424642 1267 ntBASIC17.3■□□□□ 0.36
CLCA1A8K7I4 Z85996.1-201ENST00000494644 937 ntBASIC17.3■□□□□ 0.36
CLCA1A8K7I4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
CLCA1A8K7I4 FEM1AP3-201ENST00000403722 1741 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms