Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TMEM235A6NFC5 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC15.83■□□□□ 0.13
TMEM235A6NFC5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
TMEM235A6NFC5 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.83■□□□□ 0.13
TMEM235A6NFC5 AL357033.4-201ENST00000617703 1807 ntBASIC15.83■□□□□ 0.12
TMEM235A6NFC5 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 SLC29A4P1-201ENST00000398760 971 ntBASIC15.83■□□□□ 0.12
TMEM235A6NFC5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 KRT8P45-201ENST00000414328 1447 ntBASIC15.83■□□□□ 0.12
TMEM235A6NFC5 GNE-204ENST00000539208 2190 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
TMEM235A6NFC5 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 MIR4758-201ENST00000577688 71 ntBASIC15.82■□□□□ 0.12
TMEM235A6NFC5 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.82■□□□□ 0.12
TMEM235A6NFC5 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.82■□□□□ 0.12
TMEM235A6NFC5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 SLC25A6P5-201ENST00000435663 894 ntBASIC15.81■□□□□ 0.12
TMEM235A6NFC5 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 AC006970.2-201ENST00000450065 779 ntBASIC15.81■□□□□ 0.12
TMEM235A6NFC5 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 IKBKGP1-201ENST00000612193 1073 ntBASIC15.81■□□□□ 0.12
TMEM235A6NFC5 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.81■□□□□ 0.12
TMEM235A6NFC5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM235A6NFC5 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM235A6NFC5 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms