Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC27.32■■□□□ 1.96
HFM1A2PYH4 AC092119.3-201ENST00000612618 583 ntBASIC27.32■■□□□ 1.96
HFM1A2PYH4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
HFM1A2PYH4 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC27.31■■□□□ 1.96
HFM1A2PYH4 AL845331.1-201ENST00000424978 1190 ntBASIC27.31■■□□□ 1.96
HFM1A2PYH4 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC27.31■■□□□ 1.96
HFM1A2PYH4 CIB2-208ENST00000560618 804 ntTSL 2 BASIC27.31■■□□□ 1.96
HFM1A2PYH4 AP002414.4-201ENST00000589764 1148 ntBASIC27.31■■□□□ 1.96
HFM1A2PYH4 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
HFM1A2PYH4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
HFM1A2PYH4 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
HFM1A2PYH4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
HFM1A2PYH4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
HFM1A2PYH4 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC27.3■■□□□ 1.96
HFM1A2PYH4 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC27.3■■□□□ 1.96
HFM1A2PYH4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC27.3■■□□□ 1.96
HFM1A2PYH4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
HFM1A2PYH4 AL592071.1-201ENST00000611956 408 ntBASIC27.3■■□□□ 1.96
HFM1A2PYH4 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
HFM1A2PYH4 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 AL353692.3-201ENST00000407031 1396 ntBASIC27.29■■□□□ 1.96
HFM1A2PYH4 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC27.29■■□□□ 1.96
HFM1A2PYH4 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
HFM1A2PYH4 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC27.28■■□□□ 1.96
HFM1A2PYH4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC27.28■■□□□ 1.96
HFM1A2PYH4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC27.28■■□□□ 1.96
HFM1A2PYH4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 RN7SL606P-201ENST00000472779 293 ntBASIC27.28■■□□□ 1.96
HFM1A2PYH4 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC27.28■■□□□ 1.96
HFM1A2PYH4 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC27.28■■□□□ 1.96
HFM1A2PYH4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC27.28■■□□□ 1.96
HFM1A2PYH4 AL353801.3-201ENST00000609898 542 ntBASIC27.28■■□□□ 1.96
HFM1A2PYH4 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
HFM1A2PYH4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HFM1A2PYH4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HFM1A2PYH4 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HFM1A2PYH4 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
HFM1A2PYH4 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
HFM1A2PYH4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC27.27■■□□□ 1.96
HFM1A2PYH4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
HFM1A2PYH4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 DDT-203ENST00000403754 569 ntTSL 3 BASIC27.26■■□□□ 1.95
HFM1A2PYH4 DDT-206ENST00000430101 573 ntTSL 2 BASIC27.26■■□□□ 1.95
HFM1A2PYH4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC27.26■■□□□ 1.95
HFM1A2PYH4 MPI-205ENST00000562606 1052 ntTSL 3 BASIC27.26■■□□□ 1.95
HFM1A2PYH4 AC008687.5-201ENST00000593746 558 ntBASIC27.26■■□□□ 1.95
HFM1A2PYH4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC27.26■■□□□ 1.95
HFM1A2PYH4 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
HFM1A2PYH4 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC27.26■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms