Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 AL138688.1-201ENST00000624851 1594 ntBASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC14.47□□□□□ -0.09
TRAV1-1A0A0B4J248 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 KRT18P55-202ENST00000578578 1546 ntBASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 AL390719.1-204ENST00000412397 1219 ntBASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 AL391005.1-201ENST00000623953 2435 ntBASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
TRAV1-1A0A0B4J248 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
TRAV1-1A0A0B4J248 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 AC011270.2-201ENST00000624293 2550 ntBASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 TUBB8P6-201ENST00000436895 1288 ntBASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 SUDS3P1-201ENST00000505831 966 ntBASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 AC068338.2-201ENST00000563278 1430 ntBASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
TRAV1-1A0A0B4J248 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
TRAV1-1A0A0B4J248 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms