Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 FAM197Y4-202ENST00000622692 608 ntBASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 NOC2LP1-202ENST00000452600 2235 ntBASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
TRAV8-2A0A0B4J237 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 ABALON-201ENST00000629058 1903 ntBASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 HTR7P1-202ENST00000624664 4411 ntBASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 AC018470.1-201ENST00000624790 3129 ntBASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 FAM201B-201ENST00000458407 597 ntBASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 IRX5-204ENST00000560154 879 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC14.09□□□□□ -0.15
TRAV8-2A0A0B4J237 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 KRT8P45-201ENST00000414328 1447 ntBASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 AC112777.1-201ENST00000540175 1423 ntBASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC14.08□□□□□ -0.15
TRAV8-2A0A0B4J237 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 FAM197Y1-201ENST00000421178 764 ntBASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 ITM2C-210ENST00000620962 501 ntBASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 PKD1P5-201ENST00000532415 10291 ntBASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TRAV8-2A0A0B4J237 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms