Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGB1Q9Y5G3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 POU5F1P3-201ENST00000428824 1078 ntBASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 AC098934.4-201ENST00000564127 592 ntBASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGB1Q9Y5G3 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 AD000864.1-201ENST00000624076 2295 ntBASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 BX276092.2-201ENST00000417668 665 ntBASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 TSPY21P-201ENST00000433481 731 ntBASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 RNA5SP413-201ENST00000516373 109 ntBASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
PCDHGB1Q9Y5G3 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 ITM2C-210ENST00000620962 501 ntBASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
PCDHGB1Q9Y5G3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.96■□□□□ 0.31
PCDHGB1Q9Y5G3 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms