Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
CHD7Q9P2D1 AL357033.4-201ENST00000617703 1807 ntBASIC19.61■□□□□ 0.73
CHD7Q9P2D1 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 KRT18P3-201ENST00000451602 1288 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 RPS2P28-201ENST00000314255 741 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 AC211486.1-202ENST00000416371 468 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 DNAJB3-201ENST00000446806 729 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 AC211476.1-201ENST00000503899 468 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 AC021087.4-201ENST00000563761 564 ntBASIC19.6■□□□□ 0.73
CHD7Q9P2D1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CHD7Q9P2D1 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 AL138831.2-201ENST00000606564 490 ntBASIC19.59■□□□□ 0.73
CHD7Q9P2D1 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 TP73-AS1-210ENST00000637775 1455 ntBASIC19.59■□□□□ 0.73
CHD7Q9P2D1 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 RCN1P2-201ENST00000398357 915 ntBASIC19.59■□□□□ 0.73
CHD7Q9P2D1 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 CAND2-206ENST00000626378 333 ntTSL 5 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
CHD7Q9P2D1 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CHD7Q9P2D1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 RPS8P6-201ENST00000426177 609 ntBASIC19.58■□□□□ 0.72
CHD7Q9P2D1 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.58■□□□□ 0.72
CHD7Q9P2D1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.58■□□□□ 0.72
CHD7Q9P2D1 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.57■□□□□ 0.72
CHD7Q9P2D1 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms