Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 MIR574-201ENST00000385209 96 ntBASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDLIM7Q9NR12 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 MTMR9LP-203ENST00000426597 1545 ntBASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 AC099336.1-202ENST00000602961 463 ntBASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDLIM7Q9NR12 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 AC090616.6-201ENST00000582640 721 ntBASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 AC083906.6-201ENST00000641366 219 ntBASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 AC233702.3-201ENST00000578656 1387 ntBASIC20.72■□□□□ 0.91
PDLIM7Q9NR12 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PDLIM7Q9NR12 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.7■□□□□ 0.91
PDLIM7Q9NR12 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 RNA5SP419-201ENST00000515908 135 ntBASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 AC005332.3-201ENST00000589904 676 ntBASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 IL9RP2-201ENST00000423948 1312 ntBASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 HOXB1-202ENST00000577092 1414 ntBASIC20.7■□□□□ 0.9
PDLIM7Q9NR12 AC006333.2-201ENST00000607957 2099 ntBASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 AL357033.4-201ENST00000617703 1807 ntBASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PDLIM7Q9NR12 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms