Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 RPS2P52-201ENST00000469610 820 ntBASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 RAP2CP1-201ENST00000605103 478 ntBASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
SND1-IT1Q9HBX3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 AC133552.2-202ENST00000575694 574 ntBASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 AL121906.2-201ENST00000621597 723 ntBASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SND1-IT1Q9HBX3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 AC009053.2-201ENST00000563701 2365 ntBASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 ME3-201ENST00000323418 1068 ntTSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 PHB2-213ENST00000546111 858 ntTSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 AC006557.6-201ENST00000623071 864 ntBASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC12.42□□□□□ -0.42
SND1-IT1Q9HBX3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms