Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.33■□□□□ 0.21
SLIRPQ9GZT3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 DOC2GP-204ENST00000639052 2548 ntBASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 AC010536.3-201ENST00000620306 533 ntBASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SLIRPQ9GZT3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 AC027612.3-201ENST00000413684 1047 ntBASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SLIRPQ9GZT3 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 AGGF1P2-201ENST00000426656 2106 ntBASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SLIRPQ9GZT3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC16.3■□□□□ 0.2
SLIRPQ9GZT3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms