Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC010468.1-201ENST00000461022 817 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PDCD10-218ENST00000497056 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 OR2A20P-203ENST00000498397 1268 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC091860.1-201ENST00000505723 432 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC109464.2-201ENST00000510242 943 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CCNHP1-201ENST00000513311 678 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CETN3-203ENST00000522083 1026 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 OR7E2P-201ENST00000533071 889 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 OSBPL9P3-201ENST00000534523 595 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AP003717.3-201ENST00000544832 1180 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC093012.1-202ENST00000549403 582 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL121834.1-201ENST00000572284 509 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC121320.1-201ENST00000580975 839 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SLC25A36P1-201ENST00000590111 465 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC027319.1-201ENST00000591657 511 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC022517.1-201ENST00000592429 346 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ZNF208-202ENST00000597040 781 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC005828.7-201ENST00000607331 556 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL135786.2-201ENST00000608422 615 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC132216.1-201ENST00000610375 1158 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 Metazoa_SRP.198-201ENST00000610617 323 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC009163.6-201ENST00000612367 342 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NME4-211ENST00000620944 1193 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC136469.2-201ENST00000623944 1028 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC245100.8-202ENST00000629247 1058 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AP001153.1-201ENST00000641024 338 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NFIB-219ENST00000636735 1471 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 AC005831.1-201ENST00000624384 1697 ntBASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
KRTAP4-4Q9BYR3 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 BRD7P4-201ENST00000406170 1522 ntBASIC3.95□□□□□ -1.78
KRTAP4-4Q9BYR3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms