Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 VENTXP7-201ENST00000475503 772 ntBASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 PGAM5P1-201ENST00000518923 814 ntBASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC116407.3-201ENST00000623905 1129 ntBASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC9.6□□□□□ -0.87
KRTAP4-1Q9BYQ7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 CSF3-203ENST00000394148 622 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AF186996.4-201ENST00000467186 377 ntBASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC139887.3-201ENST00000568585 713 ntBASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC064862.7-201ENST00000604520 867 ntBASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AL355877.3-201ENST00000622820 899 ntBASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AL163051.1-201ENST00000569214 1512 ntBASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 TP73-AS1-210ENST00000637775 1455 ntBASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
KRTAP4-1Q9BYQ7 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC9.59□□□□□ -0.88
KRTAP4-1Q9BYQ7 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 HEIH-201ENST00000623091 1652 ntBASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
KRTAP4-1Q9BYQ7 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms