Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXC2Q99958 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXC2Q99958 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
FOXC2Q99958 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.59■□□□□ 0.09
FOXC2Q99958 AC091607.1-201ENST00000490318 1060 ntBASIC15.59■□□□□ 0.09
FOXC2Q99958 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXC2Q99958 AC145285.3-201ENST00000564603 959 ntBASIC15.59■□□□□ 0.09
FOXC2Q99958 AL049840.3-201ENST00000602669 611 ntBASIC15.59■□□□□ 0.09
FOXC2Q99958 AC114341.1-201ENST00000618070 349 ntBASIC15.59■□□□□ 0.09
FOXC2Q99958 FAM197Y3-203ENST00000618346 717 ntBASIC15.59■□□□□ 0.09
FOXC2Q99958 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC15.59■□□□□ 0.09
FOXC2Q99958 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
FOXC2Q99958 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
FOXC2Q99958 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC15.59■□□□□ 0.09
FOXC2Q99958 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
FOXC2Q99958 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC15.58■□□□□ 0.09
FOXC2Q99958 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
FOXC2Q99958 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC15.58■□□□□ 0.09
FOXC2Q99958 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FOXC2Q99958 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC15.58■□□□□ 0.09
FOXC2Q99958 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
FOXC2Q99958 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
FOXC2Q99958 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 AL591424.1-201ENST00000442569 1213 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXC2Q99958 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.58■□□□□ 0.08
FOXC2Q99958 MIR3687-2-201ENST00000577708 61 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXC2Q99958 BNIP3P18-201ENST00000593976 575 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 MIR3687-1-201ENST00000614492 61 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXC2Q99958 AC116407.3-201ENST00000623905 1129 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXC2Q99958 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXC2Q99958 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXC2Q99958 AL353692.3-201ENST00000407031 1396 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXC2Q99958 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC15.58■□□□□ 0.08
FOXC2Q99958 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
FOXC2Q99958 AF106564.1-201ENST00000607058 2553 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 KRT89P-201ENST00000620027 1478 ntBASIC15.58■□□□□ 0.08
FOXC2Q99958 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC15.58■□□□□ 0.08
FOXC2Q99958 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
FOXC2Q99958 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC15.57■□□□□ 0.08
FOXC2Q99958 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.57■□□□□ 0.08
FOXC2Q99958 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
FOXC2Q99958 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
FOXC2Q99958 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC15.57■□□□□ 0.08
FOXC2Q99958 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
FOXC2Q99958 AC132008.2-207ENST00000454517 770 ntBASIC15.57■□□□□ 0.08
FOXC2Q99958 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.57■□□□□ 0.08
FOXC2Q99958 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXC2Q99958 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 AL355877.3-201ENST00000622820 899 ntBASIC15.57■□□□□ 0.08
FOXC2Q99958 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.57■□□□□ 0.08
FOXC2Q99958 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXC2Q99958 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
FOXC2Q99958 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.57■□□□□ 0.08
FOXC2Q99958 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC15.57■□□□□ 0.08
FOXC2Q99958 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
FOXC2Q99958 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
FOXC2Q99958 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
FOXC2Q99958 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC15.56■□□□□ 0.08
FOXC2Q99958 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
FOXC2Q99958 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms