Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CDK5RAP2Q96SN8 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 MYLKP1-201ENST00000509077 1580 ntBASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.78■■□□□ 1.08
CDK5RAP2Q96SN8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 AP000867.3-201ENST00000524675 377 ntBASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 BNIP3P18-201ENST00000593976 575 ntBASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC21.77■■□□□ 1.08
CDK5RAP2Q96SN8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDK5RAP2Q96SN8 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.07
CDK5RAP2Q96SN8 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 CROCCP3-202ENST00000420820 1947 ntBASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 AC009102.3-201ENST00000623118 1491 ntBASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 IGHV3-47-201ENST00000425060 335 ntBASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
CDK5RAP2Q96SN8 TSPY19P-201ENST00000418461 509 ntBASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 TSPY18P-201ENST00000441642 509 ntBASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 AC090616.6-201ENST00000582640 721 ntBASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 KRT17P6-201ENST00000453795 1220 ntBASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
CDK5RAP2Q96SN8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 SLC25A6P4-201ENST00000586535 553 ntBASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 Z69720.1-201ENST00000601483 472 ntBASIC21.74■■□□□ 1.07
CDK5RAP2Q96SN8 AL353801.3-201ENST00000609898 542 ntBASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms