Protein–RNA interactions for Protein: Q92600

CNOT9, CCR4-NOT transcription complex subunit 9, humanhuman

Known RBP Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9Q92600 MCCD1P1-208ENST00000445732 328 ntBASIC17.11■□□□□ 0.33
CNOT9Q92600 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.11■□□□□ 0.33
CNOT9Q92600 AL355075.4-201ENST00000554988 638 ntBASIC17.11■□□□□ 0.33
CNOT9Q92600 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.11■□□□□ 0.33
CNOT9Q92600 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNOT9Q92600 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CNOT9Q92600 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.11■□□□□ 0.33
CNOT9Q92600 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CNOT9Q92600 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 KRT8P45-201ENST00000414328 1447 ntBASIC17.11■□□□□ 0.33
CNOT9Q92600 AC112777.1-201ENST00000540175 1423 ntBASIC17.11■□□□□ 0.33
CNOT9Q92600 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CNOT9Q92600 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNOT9Q92600 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CNOT9Q92600 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CNOT9Q92600 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC17.1■□□□□ 0.33
CNOT9Q92600 TSPY15P-201ENST00000457163 923 ntBASIC17.1■□□□□ 0.33
CNOT9Q92600 MIR4674-201ENST00000582457 87 ntBASIC17.1■□□□□ 0.33
CNOT9Q92600 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT9Q92600 KRT17P2-201ENST00000300992 1314 ntBASIC17.1■□□□□ 0.33
CNOT9Q92600 AC135050.7-201ENST00000624508 2218 ntBASIC17.1■□□□□ 0.33
CNOT9Q92600 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.1■□□□□ 0.33
CNOT9Q92600 AC007613.1-201ENST00000572811 2597 ntBASIC17.1■□□□□ 0.33
CNOT9Q92600 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CNOT9Q92600 AC005332.8-201ENST00000622750 2735 ntBASIC17.1■□□□□ 0.33
CNOT9Q92600 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.1■□□□□ 0.33
CNOT9Q92600 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CNOT9Q92600 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.09■□□□□ 0.33
CNOT9Q92600 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT9Q92600 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.09■□□□□ 0.33
CNOT9Q92600 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.09■□□□□ 0.33
CNOT9Q92600 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 MIR564-202ENST00000385049 94 ntBASIC17.09■□□□□ 0.33
CNOT9Q92600 MIR1238-201ENST00000408483 83 ntBASIC17.09■□□□□ 0.33
CNOT9Q92600 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CNOT9Q92600 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.09■□□□□ 0.33
CNOT9Q92600 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.09■□□□□ 0.33
CNOT9Q92600 FITM1-202ENST00000559294 800 ntBASIC17.09■□□□□ 0.33
CNOT9Q92600 AL023803.3-201ENST00000615559 522 ntBASIC17.09■□□□□ 0.33
CNOT9Q92600 MYC-208ENST00000641036 567 ntBASIC17.09■□□□□ 0.33
CNOT9Q92600 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CNOT9Q92600 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
CNOT9Q92600 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CNOT9Q92600 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CNOT9Q92600 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.08■□□□□ 0.33
CNOT9Q92600 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT9Q92600 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT9Q92600 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT9Q92600 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT9Q92600 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CNOT9Q92600 BICD1-207ENST00000551848 1962 ntBASIC17.08■□□□□ 0.33
CNOT9Q92600 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
CNOT9Q92600 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.08■□□□□ 0.33
CNOT9Q92600 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CNOT9Q92600 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.08■□□□□ 0.32
CNOT9Q92600 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.08■□□□□ 0.32
CNOT9Q92600 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
CNOT9Q92600 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 MIR4497-201ENST00000583208 89 ntBASIC17.08■□□□□ 0.32
CNOT9Q92600 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.08■□□□□ 0.32
CNOT9Q92600 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.08■□□□□ 0.32
CNOT9Q92600 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CNOT9Q92600 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CNOT9Q92600 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms