Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.78■□□□□ 0.76
SHC3Q92529 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC19.78■□□□□ 0.76
SHC3Q92529 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC3Q92529 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.78■□□□□ 0.76
SHC3Q92529 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SHC3Q92529 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SHC3Q92529 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.78■□□□□ 0.76
SHC3Q92529 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
SHC3Q92529 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC3Q92529 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.77■□□□□ 0.76
SHC3Q92529 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC3Q92529 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SHC3Q92529 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
SHC3Q92529 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC3Q92529 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC3Q92529 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.77■□□□□ 0.76
SHC3Q92529 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SHC3Q92529 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.77■□□□□ 0.76
SHC3Q92529 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
SHC3Q92529 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SHC3Q92529 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.75
SHC3Q92529 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.76■□□□□ 0.75
SHC3Q92529 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC3Q92529 SDHAP2-201ENST00000455183 2001 ntBASIC19.76■□□□□ 0.75
SHC3Q92529 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC3Q92529 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SHC3Q92529 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 LINC01568-207ENST00000641790 1380 ntBASIC19.76■□□□□ 0.75
SHC3Q92529 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 HMGA1P5-201ENST00000412453 271 ntBASIC19.76■□□□□ 0.75
SHC3Q92529 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.76■□□□□ 0.75
SHC3Q92529 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.76■□□□□ 0.75
SHC3Q92529 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.76■□□□□ 0.75
SHC3Q92529 AC104390.1-201ENST00000555663 520 ntBASIC19.76■□□□□ 0.75
SHC3Q92529 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.76■□□□□ 0.75
SHC3Q92529 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 AC112497.1-201ENST00000624824 639 ntBASIC19.76■□□□□ 0.75
SHC3Q92529 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SHC3Q92529 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SHC3Q92529 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
SHC3Q92529 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
SHC3Q92529 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC3Q92529 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
SHC3Q92529 MIR149-201ENST00000384879 89 ntBASIC19.75■□□□□ 0.75
SHC3Q92529 AC087499.1-201ENST00000418141 1075 ntBASIC19.75■□□□□ 0.75
SHC3Q92529 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.75■□□□□ 0.75
SHC3Q92529 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC3Q92529 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.75■□□□□ 0.75
SHC3Q92529 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC3Q92529 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.75■□□□□ 0.75
SHC3Q92529 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC3Q92529 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.75■□□□□ 0.75
SHC3Q92529 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
SHC3Q92529 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SHC3Q92529 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SHC3Q92529 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC3Q92529 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.74■□□□□ 0.75
SHC3Q92529 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SHC3Q92529 NOC2LP1-202ENST00000452600 2235 ntBASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms