Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
PCDH19Q8TAB3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
PCDH19Q8TAB3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 AP000593.1-201ENST00000393668 712 ntBASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 NAPSB-206ENST00000562112 1266 ntBASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
PCDH19Q8TAB3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 RN7SL850P-201ENST00000579959 291 ntBASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
PCDH19Q8TAB3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 AC099343.3-201ENST00000605834 2503 ntBASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 LINC01568-207ENST00000641790 1380 ntBASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 TMPOP1-202ENST00000424642 1267 ntBASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PCDH19Q8TAB3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 AL162741.1-201ENST00000565563 1558 ntBASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 AC135776.1-201ENST00000319817 2481 ntBASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 HOXB1-202ENST00000577092 1414 ntBASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.11■□□□□ 0.65
PCDH19Q8TAB3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms