Protein–RNA interactions for Protein: Q8IYE0

CCDC146, Coiled-coil domain-containing protein 146, humanhuman

Predictions only

Length 955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC146Q8IYE0 KRT18P41-201ENST00000518924 1277 ntBASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 AC140113.3-201ENST00000605663 199 ntBASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
CCDC146Q8IYE0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 KRT18P38-201ENST00000449496 1282 ntBASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CCDC146Q8IYE0 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 DUX4L26-201ENST00000489078 1255 ntBASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 AC104390.1-201ENST00000555663 520 ntBASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
CCDC146Q8IYE0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 AC112777.1-201ENST00000540175 1423 ntBASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 SPDYE15P-201ENST00000424157 909 ntBASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 UROS-202ENST00000368778 1556 ntTSL 2 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CCDC146Q8IYE0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 ADK-206ENST00000541550 2222 ntTSL 2 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 GRAMD4P1-201ENST00000435181 1110 ntBASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 AL359075.1-203ENST00000462729 1002 ntBASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 AC010240.3-201ENST00000607688 395 ntBASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 AL157888.1-201ENST00000631930 593 ntBASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
CCDC146Q8IYE0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms