Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 FEM1AP3-201ENST00000403722 1741 ntBASIC23.22■■□□□ 1.31
COL23A1Q86Y22 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
COL23A1Q86Y22 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 COA5-202ENST00000409997 557 ntTSL 4 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 AC007967.2-201ENST00000432613 625 ntBASIC23.21■■□□□ 1.31
COL23A1Q86Y22 HS6ST1P1-201ENST00000481504 1234 ntBASIC23.21■■□□□ 1.31
COL23A1Q86Y22 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 AC008735.5-201ENST00000623544 497 ntBASIC23.21■■□□□ 1.31
COL23A1Q86Y22 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
COL23A1Q86Y22 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 KRT18P28-201ENST00000453838 1332 ntBASIC23.2■■□□□ 1.3
COL23A1Q86Y22 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 FUOM-202ENST00000368551 628 ntTSL 3 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 ABCD1P5-201ENST00000445663 754 ntBASIC23.2■■□□□ 1.3
COL23A1Q86Y22 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 CFL1-212ENST00000531413 636 ntTSL 3 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 AC068587.9-201ENST00000641814 219 ntBASIC23.2■■□□□ 1.3
COL23A1Q86Y22 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
COL23A1Q86Y22 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 AC023274.1-201ENST00000418278 595 ntBASIC23.19■■□□□ 1.3
COL23A1Q86Y22 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 RNA5SP416-201ENST00000516838 111 ntBASIC23.19■■□□□ 1.3
COL23A1Q86Y22 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
COL23A1Q86Y22 AC092667.1-201ENST00000434301 2586 ntBASIC23.18■■□□□ 1.3
COL23A1Q86Y22 AL356309.3-201ENST00000624132 1934 ntBASIC23.18■■□□□ 1.3
COL23A1Q86Y22 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 AC011467.2-201ENST00000598425 242 ntBASIC23.18■■□□□ 1.3
COL23A1Q86Y22 AL138831.2-201ENST00000606564 490 ntBASIC23.18■■□□□ 1.3
COL23A1Q86Y22 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 Z98044.1-201ENST00000632503 1764 ntBASIC23.18■■□□□ 1.3
COL23A1Q86Y22 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 USP39-204ENST00000409766 2033 ntTSL 2 BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
COL23A1Q86Y22 AP002414.3-201ENST00000589352 1468 ntBASIC23.17■■□□□ 1.3
COL23A1Q86Y22 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
COL23A1Q86Y22 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms