Protein–RNA interactions for Protein: Q86UE3

ZNF546, Zinc finger protein 546, humanhuman

Predictions only

Length 836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546Q86UE3 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 TERF1P5-201ENST00000477545 1207 ntBASIC15.43■□□□□ 0.06
ZNF546Q86UE3 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AC023632.3-201ENST00000521633 145 ntBASIC15.43■□□□□ 0.06
ZNF546Q86UE3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AC093677.2-201ENST00000600169 1863 ntBASIC15.43■□□□□ 0.06
ZNF546Q86UE3 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 PP12613-201ENST00000424958 2230 ntBASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
ZNF546Q86UE3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 AC010536.3-201ENST00000620306 533 ntBASIC15.42■□□□□ 0.06
ZNF546Q86UE3 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
ZNF546Q86UE3 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 MFSD11-216ENST00000590393 1141 ntBASIC15.41■□□□□ 0.06
ZNF546Q86UE3 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 REXO1L9P-201ENST00000604264 2108 ntBASIC15.41■□□□□ 0.06
ZNF546Q86UE3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
ZNF546Q86UE3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms