Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 HEIH-201ENST00000623091 1652 ntBASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 AKR1C7P-201ENST00000305623 895 ntBASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RAI1Q7Z5J4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 KRT8P32-201ENST00000512863 1461 ntBASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 MRPL3P1-201ENST00000400109 1033 ntBASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.79■□□□□ 0.12
RAI1Q7Z5J4 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 IGHGP-201ENST00000390555 1178 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AL022342.1-201ENST00000400363 863 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AC099336.1-202ENST00000602961 463 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AC120114.3-201ENST00000611923 658 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 IGHV3-47-201ENST00000425060 335 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 KRT16P4-201ENST00000453883 522 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AP003733.1-201ENST00000491725 852 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AP005901.3-202ENST00000581653 237 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 MIR3180-4-201ENST00000582223 153 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 AC024563.2-201ENST00000603282 481 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 TP73-AS1-207ENST00000624167 988 ntBASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RAI1Q7Z5J4 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RAI1Q7Z5J4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.77■□□□□ 0.12
RAI1Q7Z5J4 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAI1Q7Z5J4 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI1Q7Z5J4 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAI1Q7Z5J4 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms