Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SHC4Q6S5L8 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 AC036111.1-201ENST00000533973 1582 ntBASIC20.93■□□□□ 0.94
SHC4Q6S5L8 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 AP000593.1-201ENST00000393668 712 ntBASIC20.93■□□□□ 0.94
SHC4Q6S5L8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.93■□□□□ 0.94
SHC4Q6S5L8 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.93■□□□□ 0.94
SHC4Q6S5L8 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.92■□□□□ 0.94
SHC4Q6S5L8 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 REXO1L9P-201ENST00000604264 2108 ntBASIC20.91■□□□□ 0.94
SHC4Q6S5L8 AP000525.1-201ENST00000608286 694 ntBASIC20.91■□□□□ 0.94
SHC4Q6S5L8 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SHC4Q6S5L8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 AL390955.1-201ENST00000428694 934 ntBASIC20.9■□□□□ 0.94
SHC4Q6S5L8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 AP003041.3-201ENST00000527151 707 ntBASIC20.9■□□□□ 0.94
SHC4Q6S5L8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SHC4Q6S5L8 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms