Protein–RNA interactions for Protein: Q6P9F0

CCDC62, Coiled-coil domain-containing protein 62, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC62Q6P9F0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 KRT8P50-201ENST00000562022 1438 ntBASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC62Q6P9F0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 RN7SL510P-201ENST00000581311 263 ntBASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCDC62Q6P9F0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC62Q6P9F0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC62Q6P9F0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC62Q6P9F0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC62Q6P9F0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CCDC62Q6P9F0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 KRT18P41-201ENST00000518924 1277 ntBASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.82■□□□□ 0.92
CCDC62Q6P9F0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 IGHGP-201ENST00000390555 1178 ntBASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 TK1-205ENST00000590862 642 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CCDC62Q6P9F0 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 AC090616.6-201ENST00000582640 721 ntBASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 GPR32P1-201ENST00000601788 811 ntBASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 AC024563.2-201ENST00000603282 481 ntBASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC62Q6P9F0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms