Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
RIF1Q5UIP0 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC112777.1-201ENST00000540175 1423 ntBASIC17.94■□□□□ 0.46
RIF1Q5UIP0 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 AC034236.2-201ENST00000606662 1610 ntBASIC17.94■□□□□ 0.46
RIF1Q5UIP0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
RIF1Q5UIP0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.93■□□□□ 0.46
RIF1Q5UIP0 RN7SL204P-201ENST00000582831 262 ntBASIC17.93■□□□□ 0.46
RIF1Q5UIP0 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.93■□□□□ 0.46
RIF1Q5UIP0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 KRT18P27-201ENST00000427733 1299 ntBASIC17.92■□□□□ 0.46
RIF1Q5UIP0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 TCAP-202ENST00000578283 583 ntTSL 5 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 AC006333.2-201ENST00000607957 2099 ntBASIC17.92■□□□□ 0.46
RIF1Q5UIP0 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.92■□□□□ 0.46
RIF1Q5UIP0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 AP002414.1-201ENST00000391405 1147 ntBASIC17.91■□□□□ 0.46
RIF1Q5UIP0 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.91■□□□□ 0.46
RIF1Q5UIP0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms