Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 AC026471.1-201ENST00000564629 3026 ntBASIC19.82■□□□□ 0.76
CTC1Q2NKJ3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 MIR574-201ENST00000385209 96 ntBASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CTC1Q2NKJ3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 Z83836.1-201ENST00000624605 1642 ntBASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 AKR1C7P-201ENST00000305623 895 ntBASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 MCCD1P1-208ENST00000445732 328 ntBASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 AC138894.3-201ENST00000603787 634 ntBASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CTC1Q2NKJ3 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 LETM1P2-201ENST00000597330 2178 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 KRT18P13-201ENST00000400056 1290 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 RNA5SP419-201ENST00000515908 135 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC074051.2-201ENST00000565115 352 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AF228730.7-201ENST00000641842 219 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 TREX1-205ENST00000625293 1783 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 AC233702.3-201ENST00000578656 1387 ntBASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CTC1Q2NKJ3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CTC1Q2NKJ3 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms