Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.17■□□□□ 0.98
CHMP4BP1P59074 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 AL138781.2-201ENST00000617896 1843 ntBASIC21.16■□□□□ 0.98
CHMP4BP1P59074 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 NEK4P2-201ENST00000580004 1012 ntBASIC21.16■□□□□ 0.98
CHMP4BP1P59074 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHMP4BP1P59074 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 STARP1-201ENST00000397973 869 ntBASIC21.15■□□□□ 0.98
CHMP4BP1P59074 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 AC024243.1-201ENST00000609234 778 ntBASIC21.15■□□□□ 0.98
CHMP4BP1P59074 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 GPAT2P1-201ENST00000444924 1672 ntBASIC21.15■□□□□ 0.98
CHMP4BP1P59074 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.15■□□□□ 0.98
CHMP4BP1P59074 AC036111.1-201ENST00000533973 1582 ntBASIC21.14■□□□□ 0.98
CHMP4BP1P59074 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.14■□□□□ 0.98
CHMP4BP1P59074 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHMP4BP1P59074 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC21.14■□□□□ 0.98
CHMP4BP1P59074 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
CHMP4BP1P59074 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 AL136038.3-201ENST00000561909 1096 ntBASIC21.14■□□□□ 0.97
CHMP4BP1P59074 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.14■□□□□ 0.97
CHMP4BP1P59074 NDUFV2-AS1-203ENST00000608008 779 ntBASIC21.14■□□□□ 0.97
CHMP4BP1P59074 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHMP4BP1P59074 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHMP4BP1P59074 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms