Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
VSX2P58304 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 KRT18P38-201ENST00000449496 1282 ntBASIC17.75■□□□□ 0.43
VSX2P58304 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 SEC1P-202ENST00000473944 940 ntBASIC17.75■□□□□ 0.43
VSX2P58304 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.75■□□□□ 0.43
VSX2P58304 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
VSX2P58304 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.75■□□□□ 0.43
VSX2P58304 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VSX2P58304 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
VSX2P58304 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VSX2P58304 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VSX2P58304 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 HCG11-201ENST00000411553 5696 ntBASIC17.74■□□□□ 0.43
VSX2P58304 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.74■□□□□ 0.43
VSX2P58304 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
VSX2P58304 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.74■□□□□ 0.43
VSX2P58304 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.74■□□□□ 0.43
VSX2P58304 AC034232.1-201ENST00000506026 1064 ntBASIC17.74■□□□□ 0.43
VSX2P58304 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.74■□□□□ 0.43
VSX2P58304 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.74■□□□□ 0.43
VSX2P58304 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.74■□□□□ 0.43
VSX2P58304 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.74■□□□□ 0.43
VSX2P58304 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.74■□□□□ 0.43
VSX2P58304 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VSX2P58304 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.74■□□□□ 0.43
VSX2P58304 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.74■□□□□ 0.43
VSX2P58304 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
VSX2P58304 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 KRT8P7-201ENST00000533003 1432 ntBASIC17.73■□□□□ 0.43
VSX2P58304 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 HOXB1-202ENST00000577092 1414 ntBASIC17.73■□□□□ 0.43
VSX2P58304 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VSX2P58304 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
VSX2P58304 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.73■□□□□ 0.43
VSX2P58304 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.73■□□□□ 0.43
VSX2P58304 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.73■□□□□ 0.43
VSX2P58304 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.73■□□□□ 0.43
VSX2P58304 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VSX2P58304 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 AP000974.1-201ENST00000623909 2387 ntBASIC17.73■□□□□ 0.43
VSX2P58304 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VSX2P58304 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.72■□□□□ 0.43
VSX2P58304 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.72■□□□□ 0.43
VSX2P58304 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.72■□□□□ 0.43
VSX2P58304 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
VSX2P58304 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
VSX2P58304 STARP1-201ENST00000397973 869 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms