Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH13P55290 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH13P55290 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH13P55290 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CDH13P55290 SAPCD2P4-201ENST00000424595 1171 ntBASIC18.16■□□□□ 0.5
CDH13P55290 FAM201B-201ENST00000458407 597 ntBASIC18.16■□□□□ 0.5
CDH13P55290 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH13P55290 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.16■□□□□ 0.5
CDH13P55290 AC008622.2-201ENST00000617006 1229 ntBASIC18.16■□□□□ 0.5
CDH13P55290 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 MYC-208ENST00000641036 567 ntBASIC18.16■□□□□ 0.5
CDH13P55290 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH13P55290 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH13P55290 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH13P55290 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDH13P55290 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.15■□□□□ 0.5
CDH13P55290 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 TSPY20P-201ENST00000450910 630 ntBASIC18.15■□□□□ 0.5
CDH13P55290 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.15■□□□□ 0.5
CDH13P55290 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.15■□□□□ 0.5
CDH13P55290 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH13P55290 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.15■□□□□ 0.5
CDH13P55290 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.15■□□□□ 0.5
CDH13P55290 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDH13P55290 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.15■□□□□ 0.5
CDH13P55290 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDH13P55290 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CDH13P55290 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH13P55290 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH13P55290 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDH13P55290 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH13P55290 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDH13P55290 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH13P55290 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH13P55290 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.14■□□□□ 0.49
CDH13P55290 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH13P55290 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH13P55290 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.14■□□□□ 0.49
CDH13P55290 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH13P55290 AP000692.2-201ENST00000608391 879 ntBASIC18.14■□□□□ 0.49
CDH13P55290 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH13P55290 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.14■□□□□ 0.49
CDH13P55290 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDH13P55290 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.14■□□□□ 0.49
CDH13P55290 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 FSCN1P1-201ENST00000568912 1481 ntBASIC18.14■□□□□ 0.49
CDH13P55290 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDH13P55290 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDH13P55290 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDH13P55290 FZD10-202ENST00000539839 3282 ntBASIC18.13■□□□□ 0.49
CDH13P55290 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms