Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.73■□□□□ 0.75
SSR1P43307 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.73■□□□□ 0.75
SSR1P43307 AC008040.2-201ENST00000461049 708 ntBASIC19.73■□□□□ 0.75
SSR1P43307 AC011506.1-201ENST00000474329 610 ntBASIC19.73■□□□□ 0.75
SSR1P43307 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.73■□□□□ 0.75
SSR1P43307 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.73■□□□□ 0.75
SSR1P43307 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.73■□□□□ 0.75
SSR1P43307 AC026271.3-201ENST00000571884 352 ntBASIC19.73■□□□□ 0.75
SSR1P43307 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
SSR1P43307 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 MIR6786-201ENST00000616843 113 ntBASIC19.73■□□□□ 0.75
SSR1P43307 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.73■□□□□ 0.75
SSR1P43307 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.73■□□□□ 0.75
SSR1P43307 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SSR1P43307 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.73■□□□□ 0.75
SSR1P43307 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.72■□□□□ 0.75
SSR1P43307 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.72■□□□□ 0.75
SSR1P43307 HEIH-201ENST00000623091 1652 ntBASIC19.72■□□□□ 0.75
SSR1P43307 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.72■□□□□ 0.75
SSR1P43307 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.72■□□□□ 0.75
SSR1P43307 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.72■□□□□ 0.75
SSR1P43307 AL135905.2-201ENST00000584934 1404 ntBASIC19.72■□□□□ 0.75
SSR1P43307 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.72■□□□□ 0.75
SSR1P43307 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.72■□□□□ 0.75
SSR1P43307 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SSR1P43307 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SSR1P43307 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.71■□□□□ 0.75
SSR1P43307 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SSR1P43307 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
SSR1P43307 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.71■□□□□ 0.75
SSR1P43307 CD177P1-201ENST00000606252 935 ntBASIC19.71■□□□□ 0.75
SSR1P43307 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.71■□□□□ 0.75
SSR1P43307 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SSR1P43307 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC19.71■□□□□ 0.75
SSR1P43307 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SSR1P43307 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SSR1P43307 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.71■□□□□ 0.75
SSR1P43307 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 AC126763.1-201ENST00000552015 2118 ntBASIC19.7■□□□□ 0.74
SSR1P43307 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SSR1P43307 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.7■□□□□ 0.74
SSR1P43307 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
SSR1P43307 B3GAT3P1-201ENST00000471720 806 ntBASIC19.7■□□□□ 0.74
SSR1P43307 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.7■□□□□ 0.74
SSR1P43307 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.7■□□□□ 0.74
SSR1P43307 AC130371.2-201ENST00000619443 611 ntBASIC19.7■□□□□ 0.74
SSR1P43307 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SSR1P43307 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms