Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC15.28■□□□□ 0.04
SNCAP37840 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SNCAP37840 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SNCAP37840 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
SNCAP37840 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.28■□□□□ 0.04
SNCAP37840 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
SNCAP37840 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
SNCAP37840 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC15.28■□□□□ 0.04
SNCAP37840 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SNCAP37840 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SNCAP37840 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
SNCAP37840 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC15.27■□□□□ 0.04
SNCAP37840 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC15.27■□□□□ 0.04
SNCAP37840 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC15.27■□□□□ 0.04
SNCAP37840 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.27■□□□□ 0.04
SNCAP37840 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SNCAP37840 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.27■□□□□ 0.04
SNCAP37840 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.27■□□□□ 0.04
SNCAP37840 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
SNCAP37840 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC15.27■□□□□ 0.04
SNCAP37840 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
SNCAP37840 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SNCAP37840 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
SNCAP37840 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SNCAP37840 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC15.27■□□□□ 0.03
SNCAP37840 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SNCAP37840 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 AL139384.1-201ENST00000612143 3047 ntBASIC15.27■□□□□ 0.03
SNCAP37840 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SNCAP37840 AC134043.2-201ENST00000624206 2238 ntBASIC15.27■□□□□ 0.03
SNCAP37840 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.26■□□□□ 0.03
SNCAP37840 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNCAP37840 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC15.26■□□□□ 0.03
SNCAP37840 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC15.26■□□□□ 0.03
SNCAP37840 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 PNMA6B-201ENST00000538162 1200 ntBASIC15.26■□□□□ 0.03
SNCAP37840 AC060766.5-201ENST00000590539 871 ntBASIC15.26■□□□□ 0.03
SNCAP37840 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
SNCAP37840 WT1-AS_3.1-201ENST00000613262 234 ntBASIC15.26■□□□□ 0.03
SNCAP37840 AL121829.2-201ENST00000620908 328 ntBASIC15.26■□□□□ 0.03
SNCAP37840 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 AL162741.1-201ENST00000565563 1558 ntBASIC15.26■□□□□ 0.03
SNCAP37840 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.26■□□□□ 0.03
SNCAP37840 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
SNCAP37840 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC15.26■□□□□ 0.03
SNCAP37840 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.26■□□□□ 0.03
SNCAP37840 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SNCAP37840 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SNCAP37840 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
SNCAP37840 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
SNCAP37840 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms